1. 3D - Protein Structure Prediction
  2. Targets for 6-months
  3. Server IntFOLD5-TS

CAMEO-3D: Server Pairwise Comparison 6-months Performance (2022-08-05 - 2023-01-28)

The pairwise comparison is showing the average differences of the reference with all the other servers, each on a common data subset. It is misleading to compare further servers among each other, without selecting a new reference as for each server pair the common subset may differ. Numbers in green denote scores where the reference server is better, numbers in red where another server was outperforming the reference server.

IntFOLD5-TS - Pairwise Comparison on common targets - dataset: 6-months [2022-08-05 - 2023-01-28]
Server Name
Targets
modeled		 Oligo-Targets
modeled		 Avg. Response Time
(hh:mm:ss)		 Avg.
lDDT 		Avg.
CAD-score 		Avg.
lDDT-BS 		Avg.
QS-score 		Avg.
MM-align
Dif. Com. Dif. Com. Dif. Ref Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref.
IntFOLD5-TS - Reference
Naive AlphaFoldDB 100 154 99 0 0 --35:45:48 34:25:36 -23.19 56.96 -18.29 59.24 -14.02 64.07 - - - - server100 False
PaFold 352 0 0 0 - - - - - - - - - - - - server101 True
HeliXonAI 352 0 0 0 - - - - - - - - - - - - server104 True
OpenComplex 14 167 0 0 --17:26:51 34:07:56 -26.92 57.54 -20.91 59.43 -22.51 63.31 - - - - server111 False
IntFOLD7 52 149 0 0 -03:38:32 33:51:05 -20.01 57.54 -15.67 59.55 -13.93 64.50 - - - - server113 False
Robetta 350 1 0 0 -12:16:53 62:02:54 -3.96 53.51 -4.84 54.44 2.11 56.28 - - - - server11 True
ZJUT-DeepAssembly 160 84 0 0 -41:05:23 33:12:45 -24.13 59.27 -18.77 60.89 -25.00 61.45 - - - - server120 False
MultiDFold 87 127 0 0 -41:26:24 34:28:14 -24.31 58.44 -19.01 60.14 -23.44 60.95 - - - - server121 False
MEGA-EvoGen 247 50 0 0 -36:32:53 36:37:13 -30.64 54.23 -23.43 57.27 -32.95 53.96 - - - - server122 False
AIRFold 30 158 0 0 --19:23:03 34:29:43 -26.49 58.07 -20.65 59.86 -23.46 61.49 - - - - server127 False
ManiFold 35 159 0 0 -07:05:46 34:17:05 -27.03 57.09 -21.06 59.11 -23.60 62.71 - - - - server129 False
PAthreader 84 128 0 0 -32:43:50 34:24:51 -25.18 58.45 -19.64 60.17 -24.77 60.95 - - - - server130 False
PAthreader2 127 104 0 0 -31:05:56 33:51:32 -25.50 57.88 -19.85 59.96 -24.13 60.76 - - - - server131 False
Phyre2 31 158 0 0 --33:23:04 34:22:28 13.89 58.33 11.62 60.08 10.68 63.77 - - - - server17 False
RoseTTAFold 79 135 0 0 --24:58:23 34:45:15 -13.89 57.63 -11.15 59.51 -8.79 60.89 - - - - server19 False
SWISS-MODEL 3 173 0 0 --35:27:36 34:38:10 5.73 58.08 5.72 59.75 5.55 62.86 - - - - server20 False
RaptorX 352 0 0 0 - - - - - - - - - - - - server22 True
SPARKS-X 352 0 0 0 - - - - - - - - - - - - server30 True
IntFOLD3-TS 1 173 0 0 -14:42:04 34:15:01 3.37 58.08 2.97 59.81 3.22 63.00 - - - - server33 False
NaiveBLAST 56 143 0 0 --35:27:40 34:32:50 17.34 60.02 17.17 60.92 13.49 66.40 - - - - server36 False
IntFOLD4-TS 29 161 0 0 -23:36:52 33:59:32 0.90 58.19 0.93 59.93 3.10 63.24 - - - - server58 False
PRIMO 103 126 0 0 --31:37:52 33:36:36 19.22 59.65 16.16 60.92 17.87 64.70 - - - - server61 False
PRIMO_BST_3D 142 107 0 0 --31:55:51 33:22:39 21.84 58.91 18.35 60.44 14.84 62.31 - - - - server62 False
PRIMO_HHS_3D 283 42 0 0 --28:47:46 30:51:09 19.77 59.72 16.13 61.38 10.45 69.26 - - - - server63 True
PRIMO_HHS_CL 269 53 0 0 --27:17:17 30:22:10 15.44 59.09 13.40 61.03 11.01 57.75 - - - - server64 True
PRIMO_BST_CL 110 123 0 0 --31:36:15 33:47:08 20.04 58.87 16.89 60.36 16.43 63.70 - - - - server65 False
IntFOLD6-TS 26 160 0 0 --7:10:01 33:54:39 -0.83 57.88 -0.47 59.71 -1.19 63.21 - - - - server90 False
BestSingleStructuralTemplate 41 152 0 0 --29:31:50 33:21:04 -5.04 58.75 -3.72 60.45 -4.09 61.68 - - - - server999 False
Naive AlphaFoldDB 90 78 141 0 0 --35:12:42 34:57:44 -23.97 57.47 -18.80 59.33 -18.80 64.11 - - - - server99 False
IntFOLD5-TS - model_1 per target comparison with the best: 6-months - [2022-08-05 - 2023-01-28]
Target
ref. PDB lDDT CAD-score lDDT-BS QS-score MM-align Difficulty
Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best