1. 3D - Protein Structure Prediction
  2. Targets for 1-month
  3. Server IntFOLD5-TS

CAMEO-3D: Server Pairwise Comparison 1-month Performance (2023-01-06 - 2023-01-28)

The pairwise comparison is showing the average differences of the reference with all the other servers, each on a common data subset. It is misleading to compare further servers among each other, without selecting a new reference as for each server pair the common subset may differ. Numbers in green denote scores where the reference server is better, numbers in red where another server was outperforming the reference server.

IntFOLD5-TS - Pairwise Comparison on common targets - dataset: 1-month [2023-01-06 - 2023-01-28]
Server Name
Targets
modeled		 Oligo-Targets
modeled		 Avg. Response Time
(hh:mm:ss)		 Avg.
lDDT 		Avg.
CAD-score 		Avg.
lDDT-BS 		Avg.
QS-score 		Avg.
MM-align
Dif. Com. Dif. Com. Dif. Ref Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref.
IntFOLD5-TS - Reference
Naive AlphaFoldDB 100 19 32 0 0 --34:05:40 34:01:09 -18.49 63.05 -15.19 63.48 -14.37 62.94 - - - - server100 False
PaFold 51 0 0 0 - - - - - - - - - - - - server101 True
HeliXonAI 51 0 0 0 - - - - - - - - - - - - server104 True
OpenComplex 0 51 0 0 --25:58:58 34:38:47 -22.42 61.43 -17.86 62.24 -10.21 70.54 - - - - server111 False
IntFOLD7 23 28 0 0 -17:45:10 34:18:01 -20.72 59.87 -16.53 61.06 -5.40 76.55 - - - - server113 False
Robetta 51 0 0 0 - - - - - - - - - - - - server11 True
ZJUT-DeepAssembly 51 0 0 0 - - - - - - - - - - - - server120 True
MultiDFold 51 0 0 0 - - - - - - - - - - - - server121 True
MEGA-EvoGen 51 0 0 0 - - - - - - - - - - - - server122 True
AIRFold 1 50 0 0 --18:43:46 34:24:40 -22.37 61.90 -17.97 62.58 -6.87 73.33 - - - - server127 False
ManiFold 0 51 0 0 --8:26:53 34:38:47 -21.55 61.43 -17.40 62.24 -10.53 70.54 - - - - server129 False
PAthreader 51 0 0 0 - - - - - - - - - - - - server130 True
PAthreader2 51 0 0 0 - - - - - - - - - - - - server131 True
Phyre2 2 49 0 0 --34:52:45 34:25:11 12.56 61.90 11.08 62.68 7.73 70.54 - - - - server17 False
RoseTTAFold 12 39 0 0 --24:39:47 36:25:08 -8.73 61.91 -7.38 62.23 4.83 67.26 - - - - server19 False
SWISS-MODEL 0 51 0 0 --36:54:11 35:09:47 4.32 61.43 4.74 62.24 2.11 70.54 - - - - server20 False
RaptorX 51 0 0 0 - - - - - - - - - - - - server22 True
SPARKS-X 51 0 0 0 - - - - - - - - - - - - server30 True
IntFOLD3-TS 0 51 0 0 -17:14:56 34:38:47 2.69 61.43 2.13 62.24 2.12 70.54 - - - - server33 False
NaiveBLAST 13 38 0 0 --35:36:38 34:23:48 13.31 66.77 13.98 65.69 7.17 72.33 - - - - server36 False
IntFOLD4-TS 1 50 0 0 -23:03:50 34:49:13 0.18 61.92 0.39 62.57 -0.18 70.54 - - - - server58 False
PRIMO 14 37 0 0 --32:06:22 35:04:27 14.89 62.32 12.00 62.62 12.79 69.57 - - - - server61 False
PRIMO_BST_3D 13 38 0 0 --32:51:04 34:19:07 19.00 61.73 15.89 62.53 14.72 62.64 - - - - server62 False
PRIMO_HHS_3D 46 5 0 0 --26:40:04 27:57:23 19.89 52.36 21.18 57.98 - - - - - - server63 True
PRIMO_HHS_CL 42 9 0 0 --27:58:56 28:53:29 20.40 50.97 19.64 56.27 10.17 67.98 - - - - server64 True
PRIMO_BST_CL 11 40 0 0 --32:30:40 34:50:36 15.02 59.59 12.84 60.69 13.05 69.02 - - - - server65 False
IntFOLD6-TS 0 51 0 0 --7:36:03 34:38:47 -0.88 61.43 -0.56 62.24 -0.31 70.54 - - - - server90 False
BestSingleStructuralTemplate 0 51 0 0 --30:16:42 34:38:47 -5.94 61.43 -3.97 62.24 -0.44 70.54 - - - - server999 False
Naive AlphaFoldDB 90 8 43 0 0 --35:04:12 35:02:53 -18.34 62.41 -15.16 62.76 -11.68 66.72 - - - - server99 False
IntFOLD5-TS - model_1 per target comparison with the best: 1-month - [2023-01-06 - 2023-01-28]
Target
ref. PDB lDDT CAD-score lDDT-BS QS-score MM-align Difficulty
Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best