1. 3D - Protein Structure Prediction
  2. Targets for 3-months
  3. Server IntFOLD5-TS

CAMEO-3D: Server Pairwise Comparison 3-months Performance (2022-11-04 - 2023-01-28)

The pairwise comparison is showing the average differences of the reference with all the other servers, each on a common data subset. It is misleading to compare further servers among each other, without selecting a new reference as for each server pair the common subset may differ. Numbers in green denote scores where the reference server is better, numbers in red where another server was outperforming the reference server.

IntFOLD5-TS - Pairwise Comparison on common targets - dataset: 3-months [2022-11-04 - 2023-01-28]
Server Name
Targets
modeled		 Oligo-Targets
modeled		 Avg. Response Time
(hh:mm:ss)		 Avg.
lDDT 		Avg.
CAD-score 		Avg.
lDDT-BS 		Avg.
QS-score 		Avg.
MM-align
Dif. Com. Dif. Com. Dif. Ref Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref.
IntFOLD5-TS - Reference
Naive AlphaFoldDB 100 73 46 0 0 --35:17:01 34:51:10 -25.21 59.34 -19.59 60.91 -14.51 61.88 - - - - server100 False
PaFold 162 0 0 0 - - - - - - - - - - - - server101 True
HeliXonAI 162 0 0 0 - - - - - - - - - - - - server104 True
OpenComplex 15 73 0 0 --22:54:29 33:46:23 -25.68 59.16 -20.16 60.47 -14.39 70.57 - - - - server111 False
IntFOLD7 40 62 0 0 -05:51:18 34:08:19 -20.08 58.95 -15.77 60.45 -7.96 71.08 - - - - server113 False
Robetta 162 0 0 0 - - - - - - - - - - - - server11 True
ZJUT-DeepAssembly 85 34 0 0 -40:27:23 34:32:07 -18.34 64.43 -14.74 64.44 -6.84 72.01 - - - - server120 False
MultiDFold 85 34 0 0 -41:14:59 34:32:07 -16.79 64.43 -13.66 64.44 -6.08 72.01 - - - - server121 False
MEGA-EvoGen 162 0 0 0 - - - - - - - - - - - - server122 True
AIRFold 18 72 0 0 --25:40:50 34:12:17 -24.32 60.29 -19.30 61.42 -13.01 68.85 - - - - server127 False
ManiFold 36 65 0 0 --8:08:42 34:09:51 -26.20 58.26 -20.71 59.80 -15.56 69.70 - - - - server129 False
PAthreader 85 34 0 0 -23:56:43 34:32:07 -18.50 64.43 -14.87 64.44 -6.91 72.01 - - - - server130 False
PAthreader2 101 25 0 0 -24:10:12 34:00:52 -19.21 63.79 -15.22 64.68 -4.73 72.06 - - - - server131 False
Phyre2 2 79 0 0 --33:21:02 34:14:47 14.23 59.96 11.47 61.07 11.21 69.00 - - - - server17 False
RoseTTAFold 50 59 0 0 --23:40:06 35:10:18 -12.96 59.69 -10.58 60.83 -4.65 66.67 - - - - server19 False
SWISS-MODEL 1 80 0 0 --35:16:45 34:48:14 5.51 60.13 4.76 61.14 6.13 69.00 - - - - server20 False
RaptorX 162 0 0 0 - - - - - - - - - - - - server22 True
SPARKS-X 162 0 0 0 - - - - - - - - - - - - server30 True
IntFOLD3-TS 0 80 0 0 -14:59:13 34:19:12 3.06 60.13 2.72 61.14 2.02 69.00 - - - - server33 False
NaiveBLAST 29 64 0 0 --35:32:51 34:27:39 15.87 61.93 15.44 62.01 9.54 69.00 - - - - server36 False
IntFOLD4-TS 6 78 0 0 -24:57:52 34:16:58 0.57 60.18 0.52 61.10 2.20 68.85 - - - - server58 False
PRIMO 46 59 0 0 --31:20:24 33:45:59 19.61 62.15 16.39 62.35 9.53 66.81 - - - - server61 False
PRIMO_BST_3D 58 53 0 0 --31:46:45 33:26:29 21.68 61.12 17.88 61.62 7.82 63.78 - - - - server62 False
PRIMO_HHS_3D 139 14 0 0 --27:07:22 30:33:05 24.19 62.83 19.17 62.94 9.13 87.25 - - - - server63 True
PRIMO_HHS_CL 127 22 0 0 --27:01:46 30:31:00 17.61 59.88 14.10 61.66 13.85 59.05 - - - - server64 True
PRIMO_BST_CL 42 60 0 0 --31:30:39 33:53:13 20.39 60.37 17.16 61.29 8.97 65.36 - - - - server65 False
IntFOLD6-TS 12 75 0 0 --8:59:42 34:26:58 -1.33 60.00 -0.97 61.07 -1.33 67.70 - - - - server90 False
BestSingleStructuralTemplate 9 76 0 0 --30:30:31 34:10:08 -5.26 60.60 -4.04 61.57 -1.73 67.70 - - - - server999 False
Naive AlphaFoldDB 90 40 63 0 0 --36:41:39 35:26:58 -25.14 59.06 -19.59 60.38 -13.39 66.57 - - - - server99 False
IntFOLD5-TS - model_1 per target comparison with the best: 3-months - [2022-11-04 - 2023-01-28]
Target
ref. PDB lDDT CAD-score lDDT-BS QS-score MM-align Difficulty
Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best