CAMEO-3D: Server Pairwise Comparison 1-week Performance (2022-04-16)

The pairwise comparison is showing the average differences of the reference with all the other servers, each on a common data subset. It is misleading to compare further servers among each other, without selecting a new reference as for each server pair the common subset may differ. Numbers in green denote scores where the reference server is better, numbers in red where another server was outperforming the reference server.

NaiveBLAST - Pairwise Comparison on common targets - dataset: 1-week [2022-04-16]

Server Name	Targets modeled		Oligo-Targets modeled		Avg. Response Time (hh:mm:ss)		Avg. lDDT		Avg. CAD-score		Avg. lDDT-BS		Avg. QS-score		Avg. MM-align
Server Name	Dif.	Com.	Dif.	Com.	Dif.	Ref	Dif.	Ref.	Dif.	Ref.	Dif.	Ref.	Dif.	Ref.	Dif.	Ref.
NaiveBLAST - Reference

Server Name	Targets modeled		Oligo-Targets modeled		Avg. Response Time (hh:mm:ss)		Avg. lDDT		Avg. CAD-score		Avg. lDDT-BS		Avg. QS-score		Avg. MM-align
Server Name	Dif.	Com.	Dif.	Com.	Dif.	Ref	Dif.	Ref.	Dif.	Ref.	Dif.	Ref.	Dif.	Ref.	Dif.	Ref.
NaiveBLAST - Reference
Naive AlphaFoldDB 100	10	1	0	0	--1:59:57	00:00:22	27.44	80.93	17.32	72.78	-	-	-	-	-	-
Naive AlphaFoldDB 90	5	5	0	0	--1:59:49	00:00:28	10.52	83.46	9.47	77.34	-	-	-	-	-	-
PRIMO	-1	10	0	0	-03:15:17	00:00:20	2.24	50.48	1.13	51.17	0.32	30.87	-	-	-	-
PRIMO_BST_3D	1	8	0	0	-03:02:54	00:00:17	1.60	42.19	-1.04	44.40	-10.72	30.87	-	-	-	-
PRIMO_BST_CL	-2	11	0	0	-03:14:04	00:00:19	0.40	47.19	-1.21	48.08	-3.21	26.45	-	-	-	-
PRIMO_HHS_CL	10	1	0	0	-04:13:37	00:00:10	-0.55	37.23	-0.14	50.14	-	-	-	-	-	-
Phyre2	-2	11	0	0	-01:08:41	00:00:21	-0.59	53.57	-4.27	53.27	-16.77	26.45	-	-	-	-
PRIMO_HHS_3D	10	2	0	0	-04:24:31	00:00:20	-1.48	60.55	-0.99	64.31	-	-	-	-	-	-
RocketX	-3	12	0	0	-41:28:03	00:00:20	-5.05	50.24	-8.56	50.62	0.35	26.45	-	-	-	-
SWISS-MODEL	-2	11	0	0	-00:05:10	00:00:20	-11.82	52.40	-12.49	52.49	-4.76	26.45	-	-	-	-
IntFOLD3-TS	-3	12	0	0	-42:20:04	00:00:20	-12.18	50.24	-13.25	50.62	-21.30	26.45	-	-	-	-
IntFOLD4-TS	-3	12	0	0	-62:17:04	00:00:20	-16.33	50.24	-16.00	50.62	-26.25	26.45	-	-	-	-
IntFOLD5-TS	-3	12	0	0	-29:40:50	00:00:20	-17.15	50.24	-16.07	50.62	-29.28	26.45	-	-	-	-
MultiDFold	-3	12	0	0	-79:49:27	00:00:20	-17.71	50.24	-17.84	50.62	-26.81	26.45	-	-	-	-
IntFOLD7	1	9	0	0	-39:57:36	00:00:18	-19.49	53.01	-17.55	53.12	-77.19	17.61	-	-	-	-
IntFOLD6-TS	-1	10	0	0	-26:06:26	00:00:18	-21.48	43.44	-19.01	45.05	-37.51	26.45	-	-	-	-
BestSingleStructuralTemplate	-2	11	0	0	-04:59:29	00:00:19	-24.46	47.19	-21.86	48.08	-27.40	26.45	-	-	-	-
RoseTTAFold	1	9	0	0	-50:59:05	00:00:16	-27.91	45.25	-26.10	46.08	-25.17	37.81	-	-	-	-
pureAF2_notemp	-3	12	0	0	-16:05:42	00:00:20	-29.56	50.24	-27.78	50.62	-26.36	26.45	-	-	-	-
ManiFold	-3	12	0	0	-58:46:43	00:00:20	-30.08	50.24	-27.51	50.62	-28.41	26.45	-	-	-	-
AIRFold	-3	12	0	0	-27:03:46	00:00:20	-30.49	50.24	-27.99	50.62	-26.16	26.45	-	-	-	-
SADA	-3	12	0	0	-78:25:28	00:00:20	-30.90	50.24	-29.04	50.62	-41.42	26.45	-	-	-	-
OpenComplex	-3	12	0	0	-48:56:03	00:00:20	-31.35	50.24	-28.69	50.62	-32.87	26.45	-	-	-	-
ZJUT-DeepAssembly	-3	12	0	0	-73:07:11	00:00:20	-31.45	50.24	-28.87	50.62	-41.07	26.45	-	-	-	-
PAthreader	-3	12	0	0	-25:01:19	00:00:20	-31.70	50.24	-28.49	50.62	-38.05	26.45	-	-	-	-
pureAF2_orig	-3	12	0	0	-14:24:28	00:00:20	-32.31	50.24	-29.35	50.62	-43.65	26.45	-	-	-	-
HeliXonAI	-3	12	0	0	-76:39:05	00:00:20	-32.91	50.24	-29.26	50.62	-48.17	26.45	-	-	-	-
MEGA-EvoGen	-3	12	0	0	-47:59:44	00:00:20	-33.32	50.24	-29.96	50.62	-25.55	26.45	-	-	-	-
PaFold	12	0	0	0	-	-	-	-	-	-	-	-	-	-	-	-
Robetta	12	0	0	0	-	-	-	-	-	-	-	-	-	-	-	-
RaptorX	12	0	0	0	-	-	-	-	-	-	-	-	-	-	-	-
SPARKS-X	12	0	0	0	-	-	-	-	-	-	-	-	-	-	-	-
ZlxFold	12	0	0	0	-	-	-	-	-	-	-	-	-	-	-	-



Naive AlphaFoldDB 100
Naive AlphaFoldDB 90
PRIMO
PRIMO_BST_3D
PRIMO_BST_CL
PRIMO_HHS_CL
Phyre2
PRIMO_HHS_3D
RocketX
SWISS-MODEL
IntFOLD3-TS
IntFOLD4-TS
IntFOLD5-TS
MultiDFold
IntFOLD7
IntFOLD6-TS
BestSingleStructuralTemplate
RoseTTAFold
pureAF2_notemp
ManiFold
AIRFold
SADA
OpenComplex
ZJUT-DeepAssembly
PAthreader
pureAF2_orig
HeliXonAI
MEGA-EvoGen
PaFold
Robetta
RaptorX
SPARKS-X
ZlxFold

NaiveBLAST - model_1 per target comparison with the best: 1-week - [2022-04-16]

Target	ref. PDB	lDDT			CAD-score			lDDT-BS			QS-score			MM-align			Difficulty
Target	ref. PDB	Diff	Ref	Best	Diff	Ref	Best	Diff	Ref	Best	Diff	Ref	Best	Diff	Ref	Best	Difficulty