1. 3D - Protein Structure Prediction
  2. Targets for 6-months
  3. Server PRIMO_HHS_CL

CAMEO-3D: Server Pairwise Comparison 6-months Performance (2021-10-22 - 2022-04-16)

The pairwise comparison is showing the average differences of the reference with all the other servers, each on a common data subset. It is misleading to compare further servers among each other, without selecting a new reference as for each server pair the common subset may differ. Numbers in green denote scores where the reference server is better, numbers in red where another server was outperforming the reference server.

PRIMO_HHS_CL - Pairwise Comparison on common targets - dataset: 6-months [2021-10-22 - 2022-04-16]
Server Name
Targets
modeled		 Oligo-Targets
modeled		 Avg. Response Time
(hh:mm:ss)		 Avg.
lDDT 		Avg.
CAD-score 		Avg.
lDDT-BS 		Avg.
QS-score 		Avg.
MM-align
Dif. Com. Dif. Com. Dif. Ref Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref.
PRIMO_HHS_CL - Reference
Naive AlphaFoldDB 100 1 12 0 0 --4:51:14 03:09:14 -29.73 50.08 -22.20 55.38 -22.64 61.98 - - - - server100 True
PaFold -240 36 0 0 -63:43:41 03:20:38 -18.50 52.10 -14.56 55.42 -14.15 56.93 - - - - server101 False
Robetta -212 34 0 0 -09:49:35 03:19:55 -16.98 53.00 -13.76 56.23 -12.02 56.93 - - - - server11 False
Phyre2 -295 40 0 0 --3:13:26 03:22:37 2.53 49.97 2.10 53.29 3.75 56.93 - - - - server17 False
RoseTTAFold -290 40 0 0 -07:49:52 03:20:42 -18.94 50.87 -15.39 54.38 -9.98 56.93 - - - - server19 False
SWISS-MODEL -297 39 0 0 --4:38:24 03:24:17 -8.27 50.33 -5.46 53.42 -9.60 56.93 - - - - server20 False
RaptorX -106 21 0 0 -05:53:21 03:13:26 -8.74 52.69 -7.28 56.70 5.40 73.38 - - - - server22 False
SPARKS-X 79 0 0 0 - - - - - - - - - - - - server30 True
IntFOLD3-TS -255 37 0 0 -30:18:20 03:16:43 -11.08 49.15 -7.75 53.17 -5.41 56.93 - - - - server33 False
NaiveBLAST -241 31 0 0 --4:40:16 03:20:03 9.23 52.81 9.49 54.88 7.61 61.24 - - - - server36 False
IntFOLD4-TS -242 35 0 0 -44:02:41 03:18:42 -12.81 49.28 -9.75 53.39 -8.75 61.54 - - - - server58 False
PRIMO -162 35 0 0 --2:46:29 03:14:56 9.89 49.90 7.45 53.74 9.02 57.03 - - - - server61 False
PRIMO_BST_3D -113 31 0 0 --2:53:45 03:14:07 9.17 48.98 6.96 52.88 10.98 57.81 - - - - server62 False
PRIMO_HHS_3D 12 25 0 0 -00:05:42 03:06:58 3.63 49.04 3.84 52.72 -1.04 61.33 - - - - server63 True
PRIMO_BST_CL -148 34 0 0 --2:48:11 03:19:58 9.68 50.22 7.37 54.21 12.94 58.07 - - - - server65 False
IntFOLD5-TS -228 34 0 0 -24:58:07 03:24:56 -10.53 51.23 -9.24 54.81 -9.69 56.93 - - - - server75 False
IntFOLD6-TS -259 38 0 0 -20:39:46 03:20:21 -13.10 49.97 -10.04 53.87 -7.47 56.93 - - - - server90 False
pureAF2_orig -292 41 0 0 -30:53:23 03:19:56 -31.36 50.14 -24.72 53.84 -21.97 56.93 - - - - server96 False
pureAF2_notemp -296 41 0 0 -37:36:03 03:21:40 -31.19 50.14 -24.87 53.84 -22.34 56.93 - - - - server97 False
ZlxFold -267 38 0 0 -59:27:44 03:20:52 -27.94 52.15 -21.89 55.63 -22.08 56.93 - - - - server98 False
BestSingleStructuralTemplate -274 40 0 0 -00:00:35 03:19:23 -16.83 49.97 -13.11 53.29 -10.97 56.93 - - - - server999 False
Naive AlphaFoldDB 90 -37 17 0 0 --4:54:26 03:05:57 -28.93 51.50 -21.99 55.67 -22.59 61.98 - - - - server99 False
PRIMO_HHS_CL - model_1 per target comparison with the best: 6-months - [2021-10-22 - 2022-04-16]
Target
ref. PDB lDDT CAD-score lDDT-BS QS-score MM-align Difficulty
Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best