1. 3D - Protein Structure Prediction
  2. Targets for 3-months
  3. Server BestSingleStructuralTemplate

CAMEO-3D: Server Pairwise Comparison 3-months Performance (2022-11-04 - 2023-01-28)

The pairwise comparison is showing the average differences of the reference with all the other servers, each on a common data subset. It is misleading to compare further servers among each other, without selecting a new reference as for each server pair the common subset may differ. Numbers in green denote scores where the reference server is better, numbers in red where another server was outperforming the reference server.

BestSingleStructuralTemplate - Pairwise Comparison on common targets - dataset: 3-months [2022-11-04 - 2023-01-28]
Server Name
Targets
modeled		 Oligo-Targets
modeled		 Avg. Response Time
(hh:mm:ss)		 Avg.
lDDT 		Avg.
CAD-score 		Avg.
lDDT-BS 		Avg.
QS-score 		Avg.
MM-align
Dif. Com. Dif. Com. Dif. Ref Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref.
BestSingleStructuralTemplate - Reference
Naive AlphaFoldDB 100 64 85 0 0 --5:18:08 04:49:52 -14.90 68.57 -12.19 67.68 -5.94 70.96 - - - - server100 False
PaFold 153 0 0 0 - - - - - - - - - - - - server101 True
HeliXonAI 153 0 0 0 - - - - - - - - - - - - server104 True
OpenComplex 6 142 0 0 -07:49:23 04:40:02 -16.07 68.99 -12.97 67.82 -11.60 73.31 - - - - server111 False
IntFOLD7 31 114 0 0 -35:31:44 04:34:55 -11.10 70.06 -9.40 68.48 -6.14 73.74 - - - - server113 False
Robetta 153 0 0 0 - - - - - - - - - - - - server11 True
ZJUT-DeepAssembly 76 70 0 0 -70:35:44 04:25:11 -11.86 72.34 -9.76 70.49 -11.02 73.65 - - - - server120 False
MultiDFold 76 70 0 0 -71:21:30 04:25:11 -11.09 72.34 -9.16 70.49 -10.51 73.65 - - - - server121 False
MEGA-EvoGen 153 0 0 0 - - - - - - - - - - - - server122 True
AIRFold 9 138 0 0 -05:18:52 04:46:37 -15.70 69.56 -12.78 68.31 -8.24 74.35 - - - - server127 False
ManiFold 27 122 0 0 -21:33:07 04:47:46 -15.63 68.75 -12.82 67.68 -9.61 74.82 - - - - server129 False
PAthreader 76 70 0 0 -53:07:40 04:25:11 -12.06 72.34 -9.92 70.49 -11.44 73.65 - - - - server130 False
PAthreader2 92 54 0 0 -52:27:49 04:27:16 -12.14 72.49 -10.05 70.70 -10.04 74.79 - - - - server131 False
Phyre2 -7 151 0 0 --4:54:58 04:39:52 17.51 69.44 14.34 68.23 9.38 72.91 - - - - server17 False
RoseTTAFold 41 107 0 0 -07:00:49 04:58:08 -4.06 68.92 -3.70 67.67 1.73 72.33 - - - - server19 False
SWISS-MODEL -8 152 0 0 --5:15:51 04:49:11 9.38 69.48 8.23 68.23 4.26 72.91 - - - - server20 False
RaptorX 153 0 0 0 - - - - - - - - - - - - server22 True
SPARKS-X 153 0 0 0 - - - - - - - - - - - - server30 True
IntFOLD3-TS -9 153 0 0 -44:17:00 04:40:39 7.36 69.26 5.84 68.08 2.62 72.91 - - - - server33 False
NaiveBLAST 20 125 0 0 --5:29:35 04:30:56 16.08 72.49 15.72 70.44 7.76 74.20 - - - - server36 False
IntFOLD4-TS -3 147 0 0 -54:14:58 04:38:59 5.22 69.22 3.98 68.04 1.01 73.52 - - - - server58 False
PRIMO 37 110 0 0 --2:38:29 04:24:41 17.91 68.85 15.21 67.82 8.80 72.04 - - - - server61 False
PRIMO_BST_3D 49 98 0 0 --2:45:41 04:24:55 21.38 67.85 18.01 67.07 11.28 68.94 - - - - server62 False
PRIMO_HHS_3D 130 21 0 0 --1:42:33 03:47:07 27.19 66.09 22.78 66.05 6.36 83.72 - - - - server63 True
PRIMO_HHS_CL 118 33 0 0 --1:17:36 04:09:33 22.75 64.09 18.31 64.35 18.59 74.43 - - - - server64 True
PRIMO_BST_CL 33 114 0 0 --2:54:40 04:25:54 18.66 68.43 15.68 67.34 9.04 70.87 - - - - server65 False
IntFOLD5-TS -9 153 0 0 -29:29:29 04:40:39 5.02 69.26 3.68 68.08 1.71 72.91 - - - - server75 False
IntFOLD6-TS 3 142 0 0 -22:34:00 04:46:13 4.21 69.23 3.10 67.97 0.30 71.57 - - - - server90 False
Naive AlphaFoldDB 90 31 115 0 0 --5:06:16 05:02:07 -14.35 67.01 -11.69 66.52 -9.25 69.74 - - - - server99 False
BestSingleStructuralTemplate - model_1 per target comparison with the best: 3-months - [2022-11-04 - 2023-01-28]
Target
ref. PDB lDDT CAD-score lDDT-BS QS-score MM-align Difficulty
Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best