1. 3D - Protein Structure Prediction
  2. Targets for 3-months
  3. Server PRIMO_HHS_3D

CAMEO-3D: Server Pairwise Comparison 3-months Performance (2022-01-21 - 2022-04-16)

The pairwise comparison is showing the average differences of the reference with all the other servers, each on a common data subset. It is misleading to compare further servers among each other, without selecting a new reference as for each server pair the common subset may differ. Numbers in green denote scores where the reference server is better, numbers in red where another server was outperforming the reference server.

PRIMO_HHS_3D - Pairwise Comparison on common targets - dataset: 3-months [2022-01-21 - 2022-04-16]
Server Name
Targets
modeled		 Oligo-Targets
modeled		 Avg. Response Time
(hh:mm:ss)		 Avg.
lDDT 		Avg.
CAD-score 		Avg.
lDDT-BS 		Avg.
QS-score 		Avg.
MM-align
Dif. Com. Dif. Com. Dif. Ref Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref.
PRIMO_HHS_3D - Reference
Naive AlphaFoldDB 100 -11 6 0 0 --3:05:10 02:55:31 -33.72 36.95 -30.37 40.88 -20.90 55.78 - - - - server100 True
PaFold -99 13 0 0 -70:16:27 03:08:13 -22.34 47.77 -20.07 49.86 -15.19 46.67 - - - - server101 False
HeliXonAI -121 13 0 0 -71:01:57 03:14:52 -33.48 45.05 -28.88 48.20 -21.85 43.89 - - - - server104 False
RocketX -157 18 0 0 -22:14:45 03:11:32 -16.39 43.84 -16.30 47.11 -3.57 52.64 - - - - server106 False
Robetta -96 13 0 0 -09:16:58 03:08:13 -21.71 47.77 -19.73 49.86 -14.65 46.67 - - - - server11 False
Phyre2 -154 18 0 0 --3:29:45 03:11:32 -5.48 43.84 -5.57 47.11 -6.72 52.64 - - - - server17 False
RoseTTAFold -151 18 0 0 -08:04:45 03:00:35 -25.11 43.84 -22.58 47.11 -10.52 52.64 - - - - server19 False
SWISS-MODEL -156 18 0 0 --4:54:55 03:07:31 -13.76 43.84 -11.38 47.11 -5.95 52.64 - - - - server20 False
RaptorX -52 9 0 0 -06:45:28 02:49:50 -18.60 45.99 -16.22 49.52 -9.11 44.25 - - - - server22 False
SPARKS-X 31 0 0 0 - - - - - - - - - - - - server30 True
IntFOLD3-TS -149 15 0 0 -31:32:48 03:10:00 -16.73 42.65 -14.73 45.90 -5.84 46.67 - - - - server33 False
NaiveBLAST -137 15 0 0 --4:39:07 03:21:10 -2.43 43.35 -0.58 45.99 -3.50 52.02 - - - - server36 False
IntFOLD4-TS -147 16 0 0 -40:19:42 03:11:48 -18.59 41.79 -16.28 45.53 -6.88 52.64 - - - - server58 False
PRIMO -98 16 0 0 --1:08:46 02:55:39 -0.45 41.98 -1.65 45.82 18.53 52.58 - - - - server61 False
PRIMO_BST_3D -64 16 0 0 --1:04:48 02:58:12 3.18 41.34 1.72 45.56 14.37 53.34 - - - - server62 False
PRIMO_HHS_CL -12 14 0 0 --1:57:24 03:04:13 -4.10 46.30 -4.66 49.25 1.90 61.40 - - - - server64 True
PRIMO_BST_CL -93 15 0 0 --2:58:33 03:02:10 -0.41 40.53 -1.52 44.60 18.53 52.58 - - - - server65 False
IntFOLD5-TS -158 17 0 0 -19:54:12 03:11:12 -18.95 42.68 -16.61 46.11 -7.23 52.64 - - - - server75 False
IntFOLD6-TS -152 16 0 0 -16:36:56 03:10:13 -19.58 44.37 -16.81 47.25 -10.02 46.67 - - - - server90 False
pureAF2_orig -154 17 0 0 -18:00:45 03:10:40 -34.52 44.72 -29.64 47.52 -23.14 46.67 - - - - server96 False
pureAF2_notemp -159 18 0 0 -25:54:36 03:11:32 -35.41 43.84 -30.08 47.11 -22.36 52.64 - - - - server97 False
ZlxFold -129 15 0 0 -60:16:24 03:05:17 -28.93 48.06 -25.21 50.64 -22.41 46.67 - - - - server98 False
BestSingleStructuralTemplate -147 18 0 0 --1:17:43 03:00:35 -21.71 43.84 -19.03 47.11 -22.74 52.64 - - - - server999 False
Naive AlphaFoldDB 90 -33 8 0 0 --4:36:14 03:24:18 -31.52 42.43 -27.87 45.29 -20.99 55.78 - - - - server99 False
PRIMO_HHS_3D - model_1 per target comparison with the best: 3-months - [2022-01-21 - 2022-04-16]
Target
ref. PDB lDDT CAD-score lDDT-BS QS-score MM-align Difficulty
Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best