1. 3D - Protein Structure Prediction
  2. Targets for 1-year
  3. Server IntFOLD5-TS

CAMEO-3D: Server Pairwise Comparison 1-year Performance (2023-04-07 - 2024-03-30)

The pairwise comparison is showing the average differences of the reference with all the other servers, each on a common data subset. It is misleading to compare further servers among each other, without selecting a new reference as for each server pair the common subset may differ. Numbers in green denote scores where the reference server is better, numbers in red where another server was outperforming the reference server.

IntFOLD5-TS - Pairwise Comparison on common targets - dataset: 1-year [2023-04-07 - 2024-03-30]
Server Name
Targets
modeled		 Oligo-Targets
modeled		 Avg. Response Time
(hh:mm:ss)		 Avg.
lDDT 		Avg.
CAD-score 		Avg.
lDDT-BS 		Avg.
QS-score 		Avg.
MM-align
Dif. Com. Dif. Com. Dif. Ref Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref.
IntFOLD5-TS - Reference
Naive AlphaFoldDB 100 307 167 0 0 --35:22:28 34:58:19 -25.37 57.39 -19.88 59.18 -13.13 68.30 - - - - server100 False
PaFold 684 0 0 0 - - - - - - - - - - - - server101 True
HeliXonAI 684 0 0 0 - - - - - - - - - - - - server104 True
OpenComplex -20 304 0 0 --23:45:59 34:34:32 -25.52 58.25 -20.15 59.69 -15.30 66.17 - - - - server111 False
IntFOLD7 66 278 0 0 --5:46:29 34:04:11 -21.51 58.23 -16.91 59.74 -12.30 66.54 - - - - server113 False
Robetta 682 1 0 0 --16:15:09 65:58:26 -1.83 41.66 -5.25 47.02 28.71 85.48 - - - - server11 True
ZJUT-DeepAssembly 684 0 0 0 - - - - - - - - - - - - server120 True
MultiDFold 684 0 0 0 - - - - - - - - - - - - server121 True
MEGA-EvoGen 684 0 0 0 - - - - - - - - - - - - server122 True
AIRFold 299 177 0 0 --11:08:24 34:19:59 -25.16 57.61 -19.56 59.52 -16.14 64.96 - - - - server127 False
ManiFold 262 164 0 0 --2:23:01 34:53:46 -26.27 56.09 -20.30 58.53 -15.75 64.75 - - - - server129 False
PAthreader 684 0 0 0 - - - - - - - - - - - - server130 True
PAthreader2 684 0 0 0 - - - - - - - - - - - - server131 True
Phyre2 -24 308 0 0 --34:41:16 34:38:53 13.88 58.60 10.31 59.91 7.55 67.52 - - - - server17 False
RoseTTAFold 78 260 0 0 --28:52:33 34:35:55 -12.02 58.75 -10.06 59.97 -1.78 65.96 - - - - server19 False
SWISS-MODEL -32 313 0 0 --35:15:30 34:52:16 -18.08 58.53 -13.96 59.86 -10.56 67.51 - - - - server20 False
RaptorX 684 0 0 0 - - - - - - - - - - - - server22 True
SPARKS-X 684 0 0 0 - - - - - - - - - - - - server30 True
NaiveBLAST 69 258 0 0 --36:43:00 35:17:30 16.87 60.37 16.60 61.08 11.07 69.69 - - - - server36 False
PRIMO 661 10 0 0 --38:40:47 40:55:53 14.21 61.19 12.73 61.52 23.13 72.78 - - - - server61 True
PRIMO_BST_3D 668 9 0 0 --34:44:52 36:07:02 16.75 61.47 15.45 61.93 35.98 65.34 - - - - server62 True
PRIMO_HHS_3D 676 3 0 0 --28:00:27 31:25:18 16.26 64.81 10.85 64.88 - - - - - - server63 True
PRIMO_HHS_CL 678 2 0 0 --26:02:35 29:34:17 7.58 66.00 5.64 66.73 - - - - - - server64 True
PRIMO_BST_CL 663 11 0 0 --37:41:39 39:48:10 9.72 63.25 10.09 63.27 14.04 71.66 - - - - server65 True
IntFOLD6-TS -4 315 0 0 --8:23:50 34:39:01 -0.97 58.57 -0.87 59.89 0.77 67.51 - - - - server90 False
BestSingleStructuralTemplate 31 285 0 0 --29:00:35 34:02:35 -5.44 58.54 -4.22 59.84 0.43 67.01 - - - - server999 False
Naive AlphaFoldDB 90 123 253 0 0 --36:46:49 35:29:43 -24.02 57.99 -18.75 59.48 -14.10 67.57 - - - - server99 False
IntFOLD5-TS - model_1 per target comparison with the best: 1-year - [2023-04-07 - 2024-03-30]
Target
ref. PDB lDDT CAD-score lDDT-BS QS-score MM-align Difficulty
Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best