1. 3D - Protein Structure Prediction
  2. Targets for 6-months
  3. Server IntFOLD5-TS

CAMEO-3D: Server Pairwise Comparison 6-months Performance (2023-10-06 - 2024-03-30)

The pairwise comparison is showing the average differences of the reference with all the other servers, each on a common data subset. It is misleading to compare further servers among each other, without selecting a new reference as for each server pair the common subset may differ. Numbers in green denote scores where the reference server is better, numbers in red where another server was outperforming the reference server.

IntFOLD5-TS - Pairwise Comparison on common targets - dataset: 6-months [2023-10-06 - 2024-03-30]
Server Name
Targets
modeled		 Oligo-Targets
modeled		 Avg. Response Time
(hh:mm:ss)		 Avg.
lDDT 		Avg.
CAD-score 		Avg.
lDDT-BS 		Avg.
QS-score 		Avg.
MM-align
Dif. Com. Dif. Com. Dif. Ref Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref.
IntFOLD5-TS - Reference
Naive AlphaFoldDB 100 158 189 0 0 --33:45:10 32:46:22 -18.94 64.48 -15.28 64.43 -7.86 70.03 - - - - server100 False
PaFold 350 0 0 0 - - - - - - - - - - - - server101 True
HeliXonAI 350 0 0 0 - - - - - - - - - - - - server104 True
OpenComplex 12 335 0 0 --17:36:22 32:40:20 -20.22 64.20 -16.35 64.21 -8.29 69.72 - - - - server111 False
IntFOLD7 20 327 0 0 --6:43:46 32:51:00 -16.52 64.72 -13.49 64.52 -6.81 70.53 - - - - server113 False
Robetta 350 0 0 0 --21:44:36 58:04:02 - - - - - - - - - - server11 True
ZJUT-DeepAssembly 350 0 0 0 - - - - - - - - - - - - server120 True
MultiDFold 350 0 0 0 - - - - - - - - - - - - server121 True
MEGA-EvoGen 350 0 0 0 - - - - - - - - - - - - server122 True
AIRFold 207 142 0 0 -10:03:25 30:35:14 -17.61 67.06 -14.35 66.20 -6.80 73.87 - - - - server127 False
ManiFold 281 69 0 0 -13:31:40 29:31:26 -16.41 66.12 -13.76 65.55 -6.35 80.11 - - - - server129 True
PAthreader 350 0 0 0 - - - - - - - - - - - - server130 True
PAthreader2 350 0 0 0 - - - - - - - - - - - - server131 True
Phyre2 4 344 0 0 --33:37:37 32:57:44 10.83 64.76 8.32 64.54 6.21 70.60 - - - - server17 False
RoseTTAFold 75 272 0 0 --28:08:29 33:45:51 -7.68 64.62 -6.53 64.41 2.85 69.22 - - - - server19 False
SWISS-MODEL 1 346 0 0 --34:48:53 33:18:59 -14.21 64.78 -11.26 64.52 -5.66 70.57 - - - - server20 False
RaptorX 350 0 0 0 - - - - - - - - - - - - server22 True
SPARKS-X 350 0 0 0 - - - - - - - - - - - - server30 True
NaiveBLAST 52 297 0 0 --34:41:59 33:18:29 12.20 67.09 12.30 66.07 5.25 71.73 - - - - server36 False
PRIMO 350 0 0 0 - - - - - - - - - - - - server61 True
PRIMO_BST_3D 350 0 0 0 - - - - - - - - - - - - server62 True
PRIMO_HHS_3D 350 0 0 0 - - - - - - - - - - - - server63 True
PRIMO_HHS_CL 350 0 0 0 - - - - - - - - - - - - server64 True
PRIMO_BST_CL 350 0 0 0 - - - - - - - - - - - - server65 True
IntFOLD6-TS -1 348 0 0 --7:56:30 32:58:44 -0.49 64.62 -0.57 64.46 0.24 70.57 - - - - server90 False
BestSingleStructuralTemplate 42 306 0 0 --28:38:49 32:21:15 -5.42 64.07 -3.95 64.09 -0.51 69.87 - - - - server999 False
Naive AlphaFoldDB 90 62 285 0 0 --34:49:04 33:34:32 -17.63 64.71 -14.31 64.43 -7.59 70.21 - - - - server99 False
IntFOLD5-TS - model_1 per target comparison with the best: 6-months - [2023-10-06 - 2024-03-30]
Target
ref. PDB lDDT CAD-score lDDT-BS QS-score MM-align Difficulty
Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best