CAMEO-3D: Server Pairwise Comparison 1-week Performance (2022-04-16)

The pairwise comparison is showing the average differences of the reference with all the other servers, each on a common data subset. It is misleading to compare further servers among each other, without selecting a new reference as for each server pair the common subset may differ. Numbers in green denote scores where the reference server is better, numbers in red where another server was outperforming the reference server.

IntFOLD7 - Pairwise Comparison on common targets - dataset: 1-week [2022-04-16]

Server Name	Targets modeled		Oligo-Targets modeled		Avg. Response Time (hh:mm:ss)		Avg. lDDT		Avg. CAD-score		Avg. lDDT-BS		Avg. QS-score		Avg. MM-align
Server Name	Dif.	Com.	Dif.	Com.	Dif.	Ref	Dif.	Ref.	Dif.	Ref.	Dif.	Ref.	Dif.	Ref.	Dif.	Ref.
IntFOLD7 - Reference

Server Name	Targets modeled		Oligo-Targets modeled		Avg. Response Time (hh:mm:ss)		Avg. lDDT		Avg. CAD-score		Avg. lDDT-BS		Avg. QS-score		Avg. MM-align
Server Name	Dif.	Com.	Dif.	Com.	Dif.	Ref	Dif.	Ref.	Dif.	Ref.	Dif.	Ref.	Dif.	Ref.	Dif.	Ref.
IntFOLD7 - Reference
NaiveBLAST	-1	3	0	0	--40:02:24	39:57:54	42.76	69.40	38.99	68.92	77.19	94.80	-	-	-	-
PRIMO_BST_CL	-3	5	0	0	--36:39:54	38:06:19	31.73	65.76	21.77	65.22	66.91	94.80	-	-	-	-
PRIMO_HHS_CL	9	1	0	0	--23:56:49	25:23:21	30.35	51.36	19.12	51.27	-	-	-	-	-	-
Phyre2	-3	4	0	0	--39:04:18	39:45:19	27.30	69.49	17.53	67.31	14.40	94.80	-	-	-	-
PRIMO_BST_3D	0	4	0	0	--29:49:33	30:28:34	24.94	59.22	14.61	60.35	-	-	-	-	-	-
PRIMO	-2	4	0	0	--36:49:25	37:48:37	24.75	59.22	16.49	60.35	-	-	-	-	-	-
SWISS-MODEL	-3	5	0	0	--39:28:01	38:36:09	17.60	65.76	14.07	65.22	2.67	94.80	-	-	-	-
IntFOLD3-TS	-4	5	0	0	-01:18:24	38:06:19	12.35	65.76	9.60	65.22	6.12	94.80	-	-	-	-
IntFOLD4-TS	-4	5	0	0	-20:16:07	38:06:19	11.31	65.76	8.11	65.22	4.76	94.80	-	-	-	-
RocketX	-4	5	0	0	-03:19:16	38:06:19	9.75	65.76	8.68	65.22	58.83	94.80	-	-	-	-
IntFOLD5-TS	-4	5	0	0	--12:30:13	38:06:19	8.49	65.76	7.25	65.22	2.38	94.80	-	-	-	-
IntFOLD6-TS	-2	5	0	0	--11:39:13	31:35:18	6.10	65.76	6.80	65.22	1.61	94.80	-	-	-	-
BestSingleStructuralTemplate	-3	5	0	0	--35:46:49	38:06:19	1.62	65.76	2.24	65.22	-0.02	94.80	-	-	-	-
RoseTTAFold	0	4	0	0	-19:26:18	37:34:53	-4.65	69.37	-3.06	68.71	22.83	94.80	-	-	-	-
MultiDFold	-4	5	0	0	-41:40:40	38:06:19	-9.15	65.76	-5.27	65.22	27.43	94.80	-	-	-	-
PAthreader	-4	5	0	0	--14:55:20	38:06:19	-20.14	65.76	-15.59	65.22	1.18	94.80	-	-	-	-
ManiFold	-4	5	0	0	-20:56:23	38:06:19	-20.15	65.76	-15.62	65.22	-1.45	94.80	-	-	-	-
SADA	-4	5	0	0	-40:16:56	38:06:19	-20.20	65.76	-16.20	65.22	-0.38	94.80	-	-	-	-
ZJUT-DeepAssembly	-4	5	0	0	-34:35:15	38:06:19	-20.20	65.76	-16.20	65.22	-0.38	94.80	-	-	-	-
pureAF2_orig	-4	5	0	0	--26:14:40	38:06:19	-20.21	65.76	-15.97	65.22	-1.73	94.80	-	-	-	-
pureAF2_notemp	-4	5	0	0	--25:03:57	38:06:19	-20.27	65.76	-16.19	65.22	-1.71	94.80	-	-	-	-
AIRFold	-4	5	0	0	--12:44:08	38:06:19	-20.50	65.76	-15.76	65.22	-0.74	94.80	-	-	-	-
MEGA-EvoGen	-4	5	0	0	-09:51:02	38:06:19	-20.88	65.76	-16.00	65.22	-1.25	94.80	-	-	-	-
OpenComplex	-4	5	0	0	-10:47:10	38:06:19	-21.06	65.76	-16.46	65.22	-0.27	94.80	-	-	-	-
HeliXonAI	-4	5	0	0	-38:30:08	38:06:19	-21.31	65.76	-16.62	65.22	-2.05	94.80	-	-	-	-
Naive AlphaFoldDB 100	9	1	0	0	--35:22:23	34:37:57	-35.90	51.36	-29.72	51.27	-	-	-	-	-	-
Naive AlphaFoldDB 90	4	1	0	0	--51:08:12	50:52:10	-35.93	51.36	-29.67	51.27	-	-	-	-	-	-
PaFold	11	0	0	0	-	-	-	-	-	-	-	-	-	-	-	-
Robetta	11	0	0	0	-	-	-	-	-	-	-	-	-	-	-	-
RaptorX	11	0	0	0	-	-	-	-	-	-	-	-	-	-	-	-
SPARKS-X	11	0	0	0	-	-	-	-	-	-	-	-	-	-	-	-
PRIMO_HHS_3D	9	0	0	0	--19:57:00	20:04:11	-	-	-	-	-	-	-	-	-	-
ZlxFold	11	0	0	0	-	-	-	-	-	-	-	-	-	-	-	-



NaiveBLAST
PRIMO_BST_CL
PRIMO_HHS_CL
Phyre2
PRIMO_BST_3D
PRIMO
SWISS-MODEL
IntFOLD3-TS
IntFOLD4-TS
RocketX
IntFOLD5-TS
IntFOLD6-TS
BestSingleStructuralTemplate
RoseTTAFold
MultiDFold
PAthreader
ManiFold
SADA
ZJUT-DeepAssembly
pureAF2_orig
pureAF2_notemp
AIRFold
MEGA-EvoGen
OpenComplex
HeliXonAI
Naive AlphaFoldDB 100
Naive AlphaFoldDB 90
PaFold
Robetta
RaptorX
SPARKS-X
PRIMO_HHS_3D
ZlxFold

IntFOLD7 - model_1 per target comparison with the best: 1-week - [2022-04-16]

Target	ref. PDB	lDDT			CAD-score			lDDT-BS			QS-score			MM-align			Difficulty
Target	ref. PDB	Diff	Ref	Best	Diff	Ref	Best	Diff	Ref	Best	Diff	Ref	Best	Diff	Ref	Best	Difficulty
2022-04-16_00000283_1	7x4e[A]	-15.59	84.85	OpenComplex	-11.54	79.62	ZJUT-DeepAssembly	-	-	-	-	-	-	-	-	-	Medium
2022-04-16_00000246_1	7u2r[A]	-0.44	92.39	pureAF2_orig	-0.56	85.27	ZJUT-DeepAssembly	-2.05	96.85	HeliXonAI	-	0.45	SWISS-MODEL	-	0.83	SWISS-MODEL	Medium
2022-04-16_00000197_1	7t7y[A]	-38.93	90.29	AIRFold	-32.86	84.12	AIRFold	-	-	-	-	-	-	-	-	-	Medium
2022-04-16_00000104_1	7ocn[A]	-	87.62	HeliXonAI	-	82.84	HeliXonAI	-	62.28	AIRFold	-	0.00	SWISS-MODEL	-	0.25	SWISS-MODEL	Medium
2022-04-16_00000082_2	7n3t[C]	-36.64	87.52	OpenComplex	-25.36	82.22	OpenComplex	-	-	-	-	-	-	-	-	-	Medium
2022-04-16_00000050_1	7f0o[B]	-19.08	84.46	HeliXonAI	-15.79	80.98	HeliXonAI	-	-	-	-	0.80	SWISS-MODEL	-	0.79	SWISS-MODEL	Medium