1. 3D - Protein Structure Prediction
  2. Targets for 6-months
  3. Server IntFOLD5-TS

CAMEO-3D: Server Pairwise Comparison 6-months Performance (2024-08-16 - 2025-02-08)

The pairwise comparison is showing the average differences of the reference with all the other servers, each on a common data subset. It is misleading to compare further servers among each other, without selecting a new reference as for each server pair the common subset may differ. Numbers in green denote scores where the reference server is better, numbers in red where another server was outperforming the reference server.

IntFOLD5-TS - Pairwise Comparison on common targets - dataset: 6-months [2024-08-16 - 2025-02-08]
Server Name
Targets
modeled		 Oligo-Targets
modeled		 Avg. Response Time
(hh:mm:ss)		 Avg.
lDDT 		Avg.
CAD-score 		Avg.
lDDT-BS 		Avg.
QS-score 		Avg.
MM-align
Dif. Com. Dif. Com. Dif. Ref Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref.
IntFOLD5-TS - Reference
Naive AlphaFoldDB 100 145 149 0 0 --38:24:35 38:32:58 -18.34 68.24 -15.18 66.41 -11.56 72.93 - - - - server100 False
PaFold 294 0 0 0 - - - - - - - - - - - - server101 True
HeliXonAI 294 0 0 0 - - - - - - - - - - - - server104 True
OpenComplex 2 292 0 0 --28:19:52 36:47:31 -19.33 67.46 -15.54 66.53 -12.35 70.85 - - - - server111 False
IntFOLD7 32 262 0 0 -09:25:28 35:43:43 -14.20 67.03 -11.56 66.27 -8.96 70.41 - - - - server113 False
Robetta 294 0 0 0 - - - - - - - - - - - - server11 True
MultiDFold 294 0 0 0 - - - - - - - - - - - - server121 True
AIRFold 144 150 0 0 --1:47:02 36:08:48 -20.94 66.20 -16.63 65.82 -13.68 71.88 - - - - server127 False
SAIS-Fold 41 253 0 0 --4:27:33 36:53:15 -18.26 66.90 -14.99 66.03 -12.69 71.52 - - - - server136 False
ZJUT-DeepSHFold 215 79 0 0 -37:35:30 36:09:11 -19.89 66.92 -16.31 66.25 -13.49 71.48 - - - - server137 False
Phyre2 8 286 0 0 --36:01:41 36:47:10 10.94 67.66 8.23 66.69 7.35 70.78 - - - - server17 False
RoseTTAFold 15 279 0 0 --31:32:15 36:25:15 -6.82 67.37 -5.79 66.45 4.29 72.69 - - - - server19 False
SWISS-MODEL 0 294 0 0 --37:00:01 37:07:38 -11.85 67.52 -9.07 66.57 -8.14 70.85 - - - - server20 False
RaptorX 294 0 0 0 - - - - - - - - - - - - server22 True
SPARKS-X 294 0 0 0 - - - - - - - - - - - - server30 True
NaiveBLAST 42 252 0 0 --38:33:50 37:26:44 11.60 69.11 11.66 67.52 5.75 70.68 - - - - server36 False
PRIMO 294 0 0 0 - - - - - - - - - - - - server61 True
PRIMO_BST_3D 294 0 0 0 - - - - - - - - - - - - server62 True
PRIMO_HHS_3D 294 0 0 0 - - - - - - - - - - - - server63 True
PRIMO_HHS_CL 294 0 0 0 - - - - - - - - - - - - server64 True
PRIMO_BST_CL 294 0 0 0 - - - - - - - - - - - - server65 True
IntFOLD6-TS 0 294 0 0 --7:06:05 36:48:38 -0.29 67.52 -0.32 66.57 0.41 70.85 - - - - server90 False
BestSingleStructuralTemplate 17 277 0 0 --31:19:30 36:32:07 -5.40 67.60 -4.07 66.61 -3.06 71.05 - - - - server999 False
Naive AlphaFoldDB 90 79 215 0 0 --38:38:20 38:16:47 -17.37 68.55 -14.08 66.87 -9.46 72.62 - - - - server99 False
IntFOLD5-TS - model_1 per target comparison with the best: 6-months - [2024-08-16 - 2025-02-08]
Target
ref. PDB lDDT CAD-score lDDT-BS QS-score MM-align Difficulty
Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best