1. 3D - Protein Structure Prediction
  2. Targets for 1-year
  3. Server BestSingleStructuralTemplate

CAMEO-3D: Server Pairwise Comparison 1-year Performance (2023-04-07 - 2024-03-30)

The pairwise comparison is showing the average differences of the reference with all the other servers, each on a common data subset. It is misleading to compare further servers among each other, without selecting a new reference as for each server pair the common subset may differ. Numbers in green denote scores where the reference server is better, numbers in red where another server was outperforming the reference server.

BestSingleStructuralTemplate - Pairwise Comparison on common targets - dataset: 1-year [2023-04-07 - 2024-03-30]
Server Name
Targets
modeled		 Oligo-Targets
modeled		 Avg. Response Time
(hh:mm:ss)		 Avg.
lDDT 		Avg.
CAD-score 		Avg.
lDDT-BS 		Avg.
QS-score 		Avg.
MM-align
Dif. Com. Dif. Com. Dif. Ref Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref.
BestSingleStructuralTemplate - Reference
Naive AlphaFoldDB 100 276 337 0 0 --5:03:40 05:14:28 -14.23 70.15 -11.74 68.49 -7.59 73.16 - - - - server100 False
PaFold 653 0 0 0 - - - - - - - - - - - - server101 True
HeliXonAI 653 0 0 0 - - - - - - - - - - - - server104 True
OpenComplex -51 643 0 0 -06:50:24 05:04:24 -14.32 70.59 -11.87 68.92 -9.21 71.93 - - - - server111 False
IntFOLD7 35 562 0 0 -24:19:46 04:57:20 -11.35 70.10 -9.46 68.52 -8.44 71.34 - - - - server113 False
Robetta 651 0 0 0 - - - - - - - - - - - - server11 True
ZJUT-DeepAssembly 653 0 0 0 - - - - - - - - - - - - server120 True
MultiDFold 653 0 0 0 - - - - - - - - - - - - server121 True
MEGA-EvoGen 653 0 0 0 - - - - - - - - - - - - server122 True
AIRFold 268 350 0 0 -18:05:12 04:59:20 -13.83 71.05 -11.48 69.31 -8.79 73.42 - - - - server127 False
ManiFold 231 392 0 0 -29:11:24 05:08:53 -13.09 71.91 -10.97 69.89 -9.59 74.21 - - - - server129 False
PAthreader 653 0 0 0 - - - - - - - - - - - - server130 True
PAthreader2 653 0 0 0 - - - - - - - - - - - - server131 True
Phyre2 -55 642 0 0 --4:10:39 05:06:51 15.93 70.82 12.04 69.07 8.07 72.15 - - - - server17 False
RoseTTAFold 47 555 0 0 -01:19:59 05:00:37 -1.99 71.03 -2.17 69.26 2.95 71.78 - - - - server19 False
SWISS-MODEL -63 649 0 0 --6:52:07 05:15:00 -7.40 70.82 -5.91 69.07 -6.18 72.03 - - - - server20 False
RaptorX 653 0 0 0 - - - - - - - - - - - - server22 True
SPARKS-X 653 0 0 0 - - - - - - - - - - - - server30 True
NaiveBLAST 38 556 0 0 --6:44:56 05:15:33 17.06 72.11 16.26 70.05 7.42 73.59 - - - - server36 False
PRIMO 630 21 0 0 --2:44:54 04:50:42 13.19 76.75 11.59 73.33 11.54 71.68 - - - - server61 True
PRIMO_BST_3D 637 15 0 0 --2:53:24 03:51:36 17.28 75.62 15.27 72.46 20.98 64.09 - - - - server62 True
PRIMO_HHS_3D 645 8 0 0 --1:55:05 03:30:40 13.76 82.43 10.24 77.49 2.62 97.04 - - - - server63 True
PRIMO_HHS_CL 647 6 0 0 -00:31:35 03:05:17 16.24 79.66 11.55 75.45 2.98 57.58 - - - - server64 True
PRIMO_BST_CL 632 19 0 0 --2:17:21 05:09:17 11.23 75.39 10.55 72.38 8.26 72.02 - - - - server65 True
IntFOLD5-TS -31 616 0 0 -28:59:25 05:03:10 5.54 70.45 4.11 68.83 0.87 72.03 - - - - server75 False
IntFOLD6-TS -35 619 0 0 -21:38:39 05:04:51 4.84 70.42 3.50 68.80 1.35 71.86 - - - - server90 False
Naive AlphaFoldDB 90 92 501 0 0 --6:58:22 05:16:31 -12.81 70.36 -10.43 68.69 -7.24 73.44 - - - - server99 False
BestSingleStructuralTemplate - model_1 per target comparison with the best: 1-year - [2023-04-07 - 2024-03-30]
Target
ref. PDB lDDT CAD-score lDDT-BS QS-score MM-align Difficulty
Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best