1. 3D - Protein Structure Prediction
  2. Targets for 1-year
  3. Server SPARKS-X

CAMEO-3D: Server Pairwise Comparison 1-year Performance (2021-04-23 - 2022-04-16)

The pairwise comparison is showing the average differences of the reference with all the other servers, each on a common data subset. It is misleading to compare further servers among each other, without selecting a new reference as for each server pair the common subset may differ. Numbers in green denote scores where the reference server is better, numbers in red where another server was outperforming the reference server.

SPARKS-X - Pairwise Comparison on common targets - dataset: 1-year [2021-04-23 - 2022-04-16]
Server Name
Targets
modeled		 Oligo-Targets
modeled		 Avg. Response Time
(hh:mm:ss)		 Avg.
lDDT 		Avg.
CAD-score 		Avg.
lDDT-BS 		Avg.
QS-score 		Avg.
MM-align
Dif. Com. Dif. Com. Dif. Ref Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref.
SPARKS-X - Reference
Robetta -379 278 0 0 --5:59:44 15:06:04 -15.31 56.66 -11.01 59.89 -1.31 65.15 - - - - server11 False
Phyre2 -463 278 0 0 --14:53:31 14:37:30 4.97 56.98 3.61 60.03 1.52 66.40 - - - - server17 False
RoseTTAFold -418 238 0 0 --5:54:18 14:34:35 -17.32 56.91 -12.18 60.19 -1.97 66.01 - - - - server19 False
SWISS-MODEL -465 278 0 0 --15:08:07 15:36:55 -6.33 57.08 -2.04 60.15 0.95 66.16 - - - - server20 False
RaptorX -216 245 0 0 -03:04:37 15:30:14 -8.66 57.52 -5.83 60.37 0.43 65.25 - - - - server22 False
IntFOLD3-TS -426 281 0 0 -24:33:20 14:59:16 -7.28 56.76 -3.85 59.91 -1.76 65.40 - - - - server33 False
NaiveBLAST -369 249 0 0 --15:17:53 14:42:32 3.31 58.54 7.30 61.05 5.80 66.27 - - - - server36 False
IntFOLD4-TS -359 232 0 0 -43:26:21 15:27:30 -9.37 56.14 -5.39 59.70 -2.90 62.93 - - - - server58 False
PRIMO -60 57 0 0 --10:42:04 12:09:21 1.48 52.15 4.08 56.97 8.18 59.06 - - - - server61 False
PRIMO_BST_3D 3 50 0 0 --10:12:20 12:36:15 1.63 49.76 4.44 55.39 12.62 60.30 - - - - server62 False
PRIMO_HHS_3D 189 11 0 0 --12:53:53 14:36:37 -6.21 45.16 -1.82 51.72 16.14 45.67 - - - - server63 True
PRIMO_HHS_CL 170 17 0 0 --8:08:07 11:04:16 -5.02 46.35 0.51 53.35 1.90 61.11 - - - - server64 True
PRIMO_BST_CL -42 57 0 0 --10:12:46 12:30:17 0.88 50.13 3.73 55.51 8.71 58.01 - - - - server65 False
IntFOLD5-TS -386 269 0 0 -27:53:52 15:19:13 -9.79 56.96 -5.88 60.08 -2.15 65.32 - - - - server75 False
IntFOLD6-TS -426 278 0 0 -15:35:58 14:53:26 -10.26 56.68 -6.38 59.91 -2.67 65.01 - - - - server90 False
BestSingleStructuralTemplate -417 261 0 0 --11:58:28 14:39:18 -14.10 57.25 -9.53 60.12 -3.55 66.17 - - - - server999 False
SPARKS-X - model_1 per target comparison with the best: 1-year - [2021-04-23 - 2022-04-16]
Target
ref. PDB lDDT CAD-score lDDT-BS QS-score MM-align Difficulty
Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best