1. 3D - Protein Structure Prediction
  2. Targets for 1-year
  3. Server AIRFold

CAMEO-3D: Server Pairwise Comparison 1-year Performance (2024-03-15 - 2025-03-08)

The pairwise comparison is showing the average differences of the reference with all the other servers, each on a common data subset. It is misleading to compare further servers among each other, without selecting a new reference as for each server pair the common subset may differ. Numbers in green denote scores where the reference server is better, numbers in red where another server was outperforming the reference server.

AIRFold - Pairwise Comparison on common targets - dataset: 1-year [2024-03-15 - 2025-03-08]
Server Name
Targets
modeled		 Oligo-Targets
modeled		 Avg. Response Time
(hh:mm:ss)		 Avg.
lDDT 		Avg.
CAD-score 		Avg.
lDDT-BS 		Avg.
QS-score 		Avg.
MM-align
Dif. Com. Dif. Com. Dif. Ref Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref. Dif. Ref.
AIRFold - Reference
Naive AlphaFoldDB 100 21 169 0 0 --38:15:52 38:34:25 0.80 87.40 0.82 82.40 -0.30 85.55 - - - - server100 False
PaFold 338 0 0 0 - - - - - - - - - - - - server101 True
HeliXonAI 338 0 0 0 - - - - - - - - - - - - server104 True
OpenComplex -285 337 0 0 --31:54:37 37:52:26 -0.20 87.00 -0.08 82.13 -0.39 85.65 - - - - server111 False
IntFOLD7 -249 310 0 0 -03:14:03 36:27:35 5.63 86.80 4.36 82.01 5.18 85.26 - - - - server113 False
Robetta 337 0 0 0 - - - - - - - - - - - - server11 True
MultiDFold 338 0 0 0 - - - - - - - - - - - - server121 True
Phyre2 -288 334 0 0 --38:49:18 37:46:13 31.60 87.01 24.36 82.14 23.98 85.62 - - - - server17 False
RoseTTAFold -196 295 0 0 --33:05:53 37:24:57 11.82 86.81 9.14 82.05 15.58 85.23 - - - - server19 False
SWISS-MODEL -300 338 0 0 --39:30:55 38:38:49 7.27 86.99 6.23 82.12 3.36 85.65 - - - - server20 False
RaptorX 338 0 0 0 - - - - - - - - - - - - server22 True
SPARKS-X 338 0 0 0 - - - - - - - - - - - - server30 True
NaiveBLAST -206 289 0 0 --39:30:57 38:29:40 30.28 87.52 26.91 82.38 20.22 85.03 - - - - server36 False
PRIMO 338 0 0 0 - - - - - - - - - - - - server61 True
PRIMO_BST_3D 338 0 0 0 - - - - - - - - - - - - server62 True
PRIMO_HHS_3D 338 0 0 0 - - - - - - - - - - - - server63 True
PRIMO_HHS_CL 338 0 0 0 - - - - - - - - - - - - server64 True
PRIMO_BST_CL 338 0 0 0 - - - - - - - - - - - - server65 True
IntFOLD5-TS -295 338 0 0 --2:17:47 37:50:20 19.94 86.99 15.93 82.12 12.81 85.65 - - - - server75 False
IntFOLD6-TS -303 338 0 0 --9:27:53 37:50:20 19.40 86.99 15.35 82.12 14.41 85.65 - - - - server90 False
BestSingleStructuralTemplate -261 321 0 0 --32:02:13 37:19:27 15.05 87.08 12.06 82.15 11.33 85.44 - - - - server999 False
Naive AlphaFoldDB 90 -125 237 0 0 --39:51:34 38:58:40 1.56 87.47 1.55 82.43 1.88 86.97 - - - - server99 False
AIRFold - model_1 per target comparison with the best: 1-year - [2024-03-15 - 2025-03-08]
Target
ref. PDB lDDT CAD-score lDDT-BS QS-score MM-align Difficulty
Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best Diff Ref Best