Title
Crystal structure of synthetic ubiquitin variant R10 designed by ProteinMPNN
Method
X-RAY DIFFRACTION; 1.55 Å
Target Sequence
Sequence
Target Structure
Chain A
Quaternary State
Monomer
Oligo Target Structure
Biounit 1 ; Biounit 2

Submitted model details

1
103
Structure (23 - 101, 79 res.)
Phyre2, model-1 (21 - 101)
RoseTTAFold, model-1 (1 - 103)
RoseTTAFold, model-2 (1 - 103)
RoseTTAFold, model-3 (1 - 103)
RoseTTAFold, model-4 (1 - 103)
RoseTTAFold, model-5 (1 - 103)
SWISS-MODEL, model-1 (24 - 102)
SWISS-MODEL, model-2 (25 - 100)
NaiveBLAST, model-1 (25 - 102)
IntFOLD5-TS, model-1 (1 - 103)
IntFOLD5-TS, model-2 (1 - 103)
IntFOLD5-TS, model-3 (1 - 103)
IntFOLD5-TS, model-4 (1 - 103)
IntFOLD5-TS, model-5 (1 - 103)
IntFOLD6-TS, model-1 (1 - 103)
IntFOLD6-TS, model-2 (1 - 103)
IntFOLD6-TS, model-3 (1 - 103)
IntFOLD6-TS, model-4 (1 - 103)
IntFOLD6-TS, model-5 (1 - 103)
OpenComplex, model-1 (1 - 103)
OpenComplex, model-2 (1 - 103)
OpenComplex, model-3 (1 - 103)
OpenComplex, model-4 (1 - 103)
OpenComplex, model-5 (1 - 103)
IntFOLD7, model-1 (1 - 103)
IntFOLD7, model-2 (1 - 103)
IntFOLD7, model-3 (1 - 103)
IntFOLD7, model-4 (1 - 103)
IntFOLD7, model-5 (1 - 103)
BestSingleStructuralTemplate, model-1 (1 - 103)

Colors: Query Sequence | Target Structure Coordinates | Model #1 Coordinates

3D Prediction

Target Structure

Server Evaluations

Server Name
Predictions Resp. time
(hh:mm:ss)
From To Cov. (%) lDDT lDDT Cα Avg. lDDT-BS Avg. lDDT-BS details Model Conf. lDDT QS-score Oligo details QS-score Best Match lDDT Oligo MM-align TM-score MM-align RMSD QScore CAD-Score GDT_HA RMSD GDC Model Conf. MaxSub TM-score