2026-11-07_00000177
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ligand
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9RZW
Crystal structure of PNGase A from Bifidobacterium bifidum LMG13195;
X-ray diffraction 1.90Å
Protein #1
568 residues (95% resolved)
Raw Sequence ...
MGSSHHHHHHSSGLVPRGSHMDNTIAGHADDPVTVKPEVTRPTSRSCTVTLADHFKSNTESGAAQFYSGTITPPSECPGPWAKVVLDSSTVVSGRQYDRTGSLTIGGVTIWTGTTQEPDGQTPTTFSFAKDITRYSALFQKPQAFSGGYTNYTSDVYTGVYDQTVKITFYEADEKNPAPAVPNQVVGVAIPDLNPKSASADLTLPMLPRNLTQAQLEVTLKGNGCDEQWFDATPDDLNSHFSDAVSTQMLCGAGPYREAAVSVDGTAAGAVNTFPHIYSGGIVPTLWRPVLALDTFDLRSESLDLTPFVGTLVDGGKHRLGLSINPINDTWNVTATLFLTTDDKLDQTSGNLLQANAPAASITSTNQATGNGNERSYIVNGSRNDTISGYVDTSAGRITTTTTYTRAFQQNGTISVSDGNDFKQSMKQTDTVKYQSKSVNDKGDVVRSVNLGEEYPIAVDLTAYDFMSDNGYDFDGHVNMSQNVKREIAGGTTASLYPAADYRWNLDTYGVMARANGALTKSDGHSIATYDGTDDAGATWSNRVETQSGKVIKHTSAQTSLEHHHHHH
Canonical Sequence ...
MGSSHHHHHHSSGLVPRGSHMDNTIAGHADDPVTVKPEVTRPTSRSCTVTLADHFKSNTESGAAQFYSGTITPPSECPGPWAKVVLDSSTVVSGRQYDRTGSLTIGGVTIWTGTTQEPDGQTPTTFSFAKDITRYSALFQKPQAFSGGYTNYTSDVYTGVYDQTVKITFYEADEKNPAPAVPNQVVGVAIPDLNPKSASADLTLPMLPRNLTQAQLEVTLKGNGCDEQWFDATPDDLNSHFSDAVSTQMLCGAGPYREAAVSVDGTAAGAVNTFPHIYSGGIVPTLWRPVLALDTFDLRSESLDLTPFVGTLVDGGKHRLGLSINPINDTWNVTATLFLTTDDKLDQTSGNLLQANAPAASITSTNQATGNGNERSYIVNGSRNDTISGYVDTSAGRITTTTTYTRAFQQNGTISVSDGNDFKQSMKQTDTVKYQSKSVNDKGDVVRSVNLGEEYPIAVDLTAYDFMSDNGYDFDGHVNMSQNVKREIAGGTTASLYPAADYRWNLDTYGVMARANGALTKSDGHSIATYDGTDDAGATWSNRVETQSGKVIKHTSAQTSLEHHHHHH
Non polymer #2
CL
InChI=1S/ClH/h1H/p-1
InChI=1S/ClH/h1H/p-1
SMILES: [Cl-]
[Cl-]
Non polymer #3
MG
InChI=1S/Mg/q+2
InChI=1S/Mg/q+2
SMILES: [Mg+2]
[Mg+2]
Non polymer #4
PEG
InChI=1S/C4H10O3/c5-1-3-7-4-2-6/h5-6H,1-4H2
InChI=1S/C4H10O3/c5-1-3-7-4-2-6/h5-6H,1-4H2
SMILES: C(COCCO)O
C(COCCO)O
Non polymer #5
PG4
InChI=1S/C8H18O5/c9-1-3-11-5-7-13-8-6-12-4-2-10/h9-10H,1-8H2
InChI=1S/C8H18O5/c9-1-3-11-5-7-13-8-6-12-4-2-10/h9-10H,1-8H2
SMILES: C(COCCOCCOCCO)O
C(COCCOCCOCCO)O
Non polymer #6
PG5
InChI=1S/C8H18O4/c1-9-3-5-11-7-8-12-6-4-10-2/h3-8H2,1-2H3
InChI=1S/C8H18O4/c1-9-3-5-11-7-8-12-6-4-10-2/h3-8H2,1-2H3
SMILES: COCCOCCOCCOC
COCCOCCOCCOC
Biounit #1
monomer
Download coordinates
Biounit #2
monomer
Download coordinates
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Model
Reference
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