2026-09-05_00000036
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ligand
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12QH
Room Temperature X-Ray Structure of SARS-CoV-2 Main Protease in Complex with noncovalent inhibitor KK-1;
X-ray diffraction 1.80Å
Protein #1
306 residues (100% resolved)
Raw Sequence ...
SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ
Canonical Sequence ...
SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ
Non polymer #2
A1DCQ
InChI=1S/C15H12Cl3FN4O3/c16-8-5-7(6-9(17)10(8)18)22-1-3-23(4-2-22)14(25)12-11(19)13(24)21-15(26)20-12/h5-6H,1-4H2,(H2,20,21,24,26)
InChI=1S/C15H12Cl3FN4O3/c16-8-5-7(6-9(17)10(8)18)22-1-3-23(4-2-22)14(25)12-11(19)13(24)21-15(26)20-12/h5-6H,1-4H2,(H2,20,21,24,26)
SMILES: c1c(cc(c(c1Cl)Cl)Cl)N2CCN(CC2)C(=O)C3=C(C(=O)NC(=O)N3)F
c1c(cc(c(c1Cl)Cl)Cl)N2CCN(CC2)C(=O)C3=C(C(=O)NC(=O)N3)F
Non polymer #3
NA
InChI=1S/Na/q+1
InChI=1S/Na/q+1
SMILES: [Na+]
[Na+]
Biounit #1
homo-dimer
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Model
Reference
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