2026-08-22_00000186
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ligand
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31DF
human Pyridoxine-5'-phosphate oxidase in complex with PLP-phenelzine in its active site;
X-ray diffraction 1.89Å
Protein #1
280 residues (75% resolved)
Raw Sequence ...
MGSSHHHHHSSGLVPRGSHMTCWLRGVTATFGRPAEWPGYLSHLCGRSAAMDLGPMRKSYRGDREAFEETHLTSLDPVKQFAAWFEEAVQ(CME)PDIGEANAMCLATCTRDGKPSARMLLLKGFGKDGFRFFTNFESRKGKELDSNPFASLVFYWEPLNRQVRVEGPVKKLPEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQDQEVPKPKSWGGYVLYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGPMTHRGEEDWLYERLAP
Canonical Sequence ...
MGSSHHHHHSSGLVPRGSHMTCWLRGVTATFGRPAEWPGYLSHLCGRSAAMDLGPMRKSYRGDREAFEETHLTSLDPVKQFAAWFEEAVQCPDIGEANAMCLATCTRDGKPSARMLLLKGFGKDGFRFFTNFESRKGKELDSNPFASLVFYWEPLNRQVRVEGPVKKLPEEEAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQDQEVPKPKSWGGYVLYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGPMTHRGEEDWLYERLAP
Non polymer #2
A1J85
InChI=1S/C16H20N3O5P/c1-12-16(20)15(14(9-17-12)11-24-25(21,22)23)10-19-18-8-7-13-5-3-2-4-6-13/h2-6,9-10,18,20H,7-8,11H2,1H3,(H2,21,22,23)/b19-10+
InChI=1S/C16H20N3O5P/c1-12-16(20)15(14(9-17-12)11-24-25(21,22)23)10-19-18-8-7-13-5-3-2-4-6-13/h2-6,9-10,18,20H,7-8,11H2,1H3,(H2,21,22,23)/b19-10+
SMILES: Cc1c(c(c(cn1)COP(=O)(O)O)/C=N/NCCc2ccccc2)O
Cc1c(c(c(cn1)COP(=O)(O)O)/C=N/NCCc2ccccc2)O
Non polymer #3
FMN
InChI=1S/C17H21N4O9P/c1-7-3-9-10(4-8(7)2)21(15-13(18-9)16(25)20-17(26)19-15)5-11(22)14(24)12(23)6-30-31(27,28)29/h3-4,11-12,14,22-24H,5-6H2,1-2H3,(H,20,25,26)(H2,27,28,29)/t11-,12+,14-/m0/s1
InChI=1S/C17H21N4O9P/c1-7-3-9-10(4-8(7)2)21(15-13(18-9)16(25)20-17(26)19-15)5-11(22)14(24)12(23)6-30-31(27,28)29/h3-4,11-12,14,22-24H,5-6H2,1-2H3,(H,20,25,26)(H2,27,28,29)/t11-,12+,14-/m0/s1
SMILES: Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)C[C@@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O
Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)C[C@@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O
Biounit #1
homo-dimer
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Model
Reference
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