2026-08-01_00000190
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hard
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25QC
Crystal structure of Pseudomonas phage YuA Pplase2 in complex with 5hmdU-DNA and glycine;
X-ray diffraction 2.20Å
Protein #1
292 residues (99% resolved)
Raw Sequence ...
GSSRNYPRLDIETFGRHLITTGDLDPIYIALVRAESAGDFSVPQLCRWLLAYWCYYHAGVASFLSEKEGEEFWHWMMVAARNEEETPAGGRWPRGHERRHYRAKIAVDSVTDLQARYGDRPENMALYVGARATEEERLPFKTVSARAQEHKGFGPWIGFKIADMMDRVMEVPVDFDNAAVFMFKDPEKAAMMLWEQREAHKYPENAKPKREAILSGVADYLIGRFADLAAPPLGDRPVNIQEVETVLCKWKSHMNGHYPLWNDIREINTGLEPWAGRCSAARAFLHHMPKEQ
Canonical Sequence ...
GSSRNYPRLDIETFGRHLITTGDLDPIYIALVRAESAGDFSVPQLCRWLLAYWCYYHAGVASFLSEKEGEEFWHWMMVAARNEEETPAGGRWPRGHERRHYRAKIAVDSVTDLQARYGDRPENMALYVGARATEEERLPFKTVSARAQEHKGFGPWIGFKIADMMDRVMEVPVDFDNAAVFMFKDPEKAAMMLWEQREAHKYPENAKPKREAILSGVADYLIGRFADLAAPPLGDRPVNIQEVETVLCKWKSHMNGHYPLWNDIREINTGLEPWAGRCSAARAFLHHMPKEQ
DNA #2
13 bases
Raw Sequence ...
(DC)(DG)(DA)(DT)(5HU)(DG)(DC)(DC)(DC)(DA)(DT)(DC)(DG)
Canonical Sequence ...
CGATUGCCCATCG
Non polymer #3
BOG
InChI=1S/C14H28O6/c1-2-3-4-5-6-7-8-19-14-13(18)12(17)11(16)10(9-15)20-14/h10-18H,2-9H2,1H3/t10-,11-,12+,13-,14-/m1/s1
InChI=1S/C14H28O6/c1-2-3-4-5-6-7-8-19-14-13(18)12(17)11(16)10(9-15)20-14/h10-18H,2-9H2,1H3/t10-,11-,12+,13-,14-/m1/s1
SMILES: CCCCCCCCO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O
CCCCCCCCO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O
Non polymer #4
CL
InChI=1S/ClH/h1H/p-1
InChI=1S/ClH/h1H/p-1
SMILES: [Cl-]
[Cl-]
Non polymer #5
EDO
InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2
InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2
SMILES: C(CO)O
C(CO)O
Non polymer #6
GLY
InChI=1S/C2H5NO2/c3-1-2(4)5/h1,3H2,(H,4,5)
InChI=1S/C2H5NO2/c3-1-2(4)5/h1,3H2,(H,4,5)
SMILES: C(C(=O)O)N
C(C(=O)O)N
Non polymer #7
MG
InChI=1S/Mg/q+2
InChI=1S/Mg/q+2
SMILES: [Mg+2]
[Mg+2]
Biounit #1
hetero-2-2-mer
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