2026-06-20_00000217
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ligand
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9RJD
X-ray structure of Leptospira interrogans Histone deacetylase 11 (HDAC11) in complex with cis-dodec-5-enoic acid;
X-ray diffraction 1.51Å
Protein #1
305 residues (99% resolved)
Raw Sequence ...
GGGMEKHLERIGLVYHPDYNLDLGPHVFPARKYQMVYDLVKRDSKLSNLYIYKPDLAKTKDLSLVHTQEFLDDFFSLNITERTQYSELPLTKQIVHSFVLAVGGTILSMELAQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPDKKILFIDLDLHQGNGNSFIFQNDPDVFTFSMHQENLYPKKEKSDLDISLEEGIGDKEYLELLEKSLRKIESDFKPDLIFYIAGADPFEGDSLGDLKLTFQGLRKRDQIVRDFAYSLNDTRVVILPAGGYAKDFYDTVTIHYNTIKIFAAD
Canonical Sequence ...
GGGMEKHLERIGLVYHPDYNLDLGPHVFPARKYQMVYDLVKRDSKLSNLYIYKPDLAKTKDLSLVHTQEFLDDFFSLNITERTQYSELPLTKQIVHSFVLAVGGTILSMELAQKYKFVYHIGGGFHHSMPDRAEGFCYLNDAAIASKLYQKEYPDKKILFIDLDLHQGNGNSFIFQNDPDVFTFSMHQENLYPKKEKSDLDISLEEGIGDKEYLELLEKSLRKIESDFKPDLIFYIAGADPFEGDSLGDLKLTFQGLRKRDQIVRDFAYSLNDTRVVILPAGGYAKDFYDTVTIHYNTIKIFAAD
Non polymer #2
A1JHJ
InChI=1S/C12H22O2/c1-2-3-4-5-6-7-8-9-10-11-12(13)14/h8-9H,2-7,10-11H2,1H3,(H,13,14)/b9-8+
InChI=1S/C12H22O2/c1-2-3-4-5-6-7-8-9-10-11-12(13)14/h8-9H,2-7,10-11H2,1H3,(H,13,14)/b9-8+
SMILES: CCCCCCC/C=C/CCC(=O)O
CCCCCCC/C=C/CCC(=O)O
Non polymer #3
CL
InChI=1S/ClH/h1H/p-1
InChI=1S/ClH/h1H/p-1
SMILES: [Cl-]
[Cl-]
Non polymer #4
EDO
InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2
InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2
SMILES: C(CO)O
C(CO)O
Non polymer #5
K
InChI=1S/K/q+1
InChI=1S/K/q+1
SMILES: [K+]
[K+]
Non polymer #6
NA
InChI=1S/Na/q+1
InChI=1S/Na/q+1
SMILES: [Na+]
[Na+]
Non polymer #7
ZN
InChI=1S/Zn/q+2
InChI=1S/Zn/q+2
SMILES: [Zn+2]
[Zn+2]
Biounit #1
monomer
Download coordinates
Biounit #2
monomer
Download coordinates
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Model
Reference
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