2026-06-13_00000133
|
medium
|
9PKT
The structure of O-glycopeptidase BcM60B from Bacteroides caccae;
X-ray diffraction 1.80Å
Protein #1
471 residues (99% resolved)
Raw Sequence ...
GSHMSESAYRLADYRPYQNPAVMATANKTSKYSLRDNPTGIYAKAGETLAIFVDDIYEGGRISMLIQDLNGGYNNSKTYELSEGYNEITVEVGGLIYILNHVNDDIPLRHEDADNDQKRNIEAKTVKVHFANGKVNGYFDIQKNKESDWAQIRDNAKYQEIDILGEYSHLTWRISDFKKYNTEITKTIENLDRLVYLEEEFMGLVKYGKMFNNRMHFSIDYKAKSPNASDYRTVYNASDYYAEPFCKPENFPTRCWGPAHEVGHCNQTRPGLKWAGLTEVTNNIMSLFIQTSFGRPCKLLVDGCTLKDENDQTLGTYNNIYQGATSLIVDGKRPHCLPGIANITRETQLVPFWQLKLYMIDVLEKTDFYHKLYEYFRTHESPSDKGENQGMNQLDFVRQVCDISGLNMLDFFEKWGFLYPVKTTLNDYGNKAFEITEEQIELLKEEINGKGYEMPHPNVHQITEINLDDYK
Canonical Sequence ...
GSHMSESAYRLADYRPYQNPAVMATANKTSKYSLRDNPTGIYAKAGETLAIFVDDIYEGGRISMLIQDLNGGYNNSKTYELSEGYNEITVEVGGLIYILNHVNDDIPLRHEDADNDQKRNIEAKTVKVHFANGKVNGYFDIQKNKESDWAQIRDNAKYQEIDILGEYSHLTWRISDFKKYNTEITKTIENLDRLVYLEEEFMGLVKYGKMFNNRMHFSIDYKAKSPNASDYRTVYNASDYYAEPFCKPENFPTRCWGPAHEVGHCNQTRPGLKWAGLTEVTNNIMSLFIQTSFGRPCKLLVDGCTLKDENDQTLGTYNNIYQGATSLIVDGKRPHCLPGIANITRETQLVPFWQLKLYMIDVLEKTDFYHKLYEYFRTHESPSDKGENQGMNQLDFVRQVCDISGLNMLDFFEKWGFLYPVKTTLNDYGNKAFEITEEQIELLKEEINGKGYEMPHPNVHQITEINLDDYK
Non polymer #2
CA
InChI=1S/Ca/q+2
InChI=1S/Ca/q+2
SMILES: [Ca+2]
[Ca+2]
Non polymer #3
EDO
InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2
InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2
SMILES: C(CO)O
C(CO)O
Non polymer #4
MLI
InChI=1S/C3H4O4/c4-2(5)1-3(6)7/h1H2,(H,4,5)(H,6,7)/p-2
InChI=1S/C3H4O4/c4-2(5)1-3(6)7/h1H2,(H,4,5)(H,6,7)/p-2
SMILES: C(C(=O)[O-])C(=O)[O-]
C(C(=O)[O-])C(=O)[O-]
Non polymer #5
SIN
InChI=1S/C4H6O4/c5-3(6)1-2-4(7)8/h1-2H2,(H,5,6)(H,7,8)
InChI=1S/C4H6O4/c5-3(6)1-2-4(7)8/h1-2H2,(H,5,6)(H,7,8)
SMILES: C(CC(=O)O)C(=O)O
C(CC(=O)O)C(=O)O
Non polymer #6
ZN
InChI=1S/Zn/q+2
InChI=1S/Zn/q+2
SMILES: [Zn+2]
[Zn+2]
Biounit #1
monomer
Download coordinates
Biounit #2
monomer
Download coordinates
Tube
Model
Reference
100%