2026-02-28_00000134
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hard
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9M0B
Crystal structure of alpha-agarase AGA from Catenovulum maritimum;
X-ray diffraction 1.64Å
Protein #1
773 residues (100% resolved)
Raw Sequence ...
GIYIQLEDFDETGTVGRVASDPNDGFVKGDSNVGWVTNGDWGKYHNVFLEAGTYRAFITVSTPAGGSYGARVDIDGEPFAWGYFDSTGGWDIAAEYELYGGDLVVESTGNHTLHIEAVGGSDWQWSGDLVRLAKVNDSTVKQPRVYNPNEHLVAEIEGPATGLQYLKTPVEIPLANKVLKSDVWYTYPQNRNLVVDGDTPYADFGATGAFWGHPPEHDFYDDTVIMDWAVNVVDDFQSEGFEYTARGEFDWGYGWFTEFTTNPQPHYVQTLDGRNVRMTFMGYLSHDGYNNNWLSNHSPAFVPFMKSQVDQILKANPDKLMFDTQTNSTRSTDMRDFGGDFSPYAMENFRVWLSKKYSYAELSAMGINDITTFDYKQHLLDAGVTHTSWSNAGDRLEGNIPMLEDFIYFNRDVWNQKFAEVLDYIRQQRPNIEIGASTHLFESRGYVFNENITFLSGELNLGARTSISELPTNILVHLKGAQAVDKTLAYFPYPWEFDELRLQNAPRFGRGWVAQAYAYGGLFSIPANVWVGGEVFTWSPGADNYRDIYQFVRAQANLFDGYTSYAKAGYVHAMFSSMKAGFIDGGNQVQSSVKILTEDNINFDMLVFGDAGYPVVPRQADFDKFEHIFYDGDLNYLTTEQKAVLDAQGSKVRHIGQRGSLAGLQINVSINGSVSNETVSAVSRIHETDSTAPYVVHLINRPFAGGVTPILNNVEVAIPASYFPEGVTSAKLHLPDGTSSTVAVSTNANGDAVVSVSNLEVWGILELAHHHHH
Canonical Sequence ...
GIYIQLEDFDETGTVGRVASDPNDGFVKGDSNVGWVTNGDWGKYHNVFLEAGTYRAFITVSTPAGGSYGARVDIDGEPFAWGYFDSTGGWDIAAEYELYGGDLVVESTGNHTLHIEAVGGSDWQWSGDLVRLAKVNDSTVKQPRVYNPNEHLVAEIEGPATGLQYLKTPVEIPLANKVLKSDVWYTYPQNRNLVVDGDTPYADFGATGAFWGHPPEHDFYDDTVIMDWAVNVVDDFQSEGFEYTARGEFDWGYGWFTEFTTNPQPHYVQTLDGRNVRMTFMGYLSHDGYNNNWLSNHSPAFVPFMKSQVDQILKANPDKLMFDTQTNSTRSTDMRDFGGDFSPYAMENFRVWLSKKYSYAELSAMGINDITTFDYKQHLLDAGVTHTSWSNAGDRLEGNIPMLEDFIYFNRDVWNQKFAEVLDYIRQQRPNIEIGASTHLFESRGYVFNENITFLSGELNLGARTSISELPTNILVHLKGAQAVDKTLAYFPYPWEFDELRLQNAPRFGRGWVAQAYAYGGLFSIPANVWVGGEVFTWSPGADNYRDIYQFVRAQANLFDGYTSYAKAGYVHAMFSSMKAGFIDGGNQVQSSVKILTEDNINFDMLVFGDAGYPVVPRQADFDKFEHIFYDGDLNYLTTEQKAVLDAQGSKVRHIGQRGSLAGLQINVSINGSVSNETVSAVSRIHETDSTAPYVVHLINRPFAGGVTPILNNVEVAIPASYFPEGVTSAKLHLPDGTSSTVAVSTNANGDAVVSVSNLEVWGILELAHHHHH
Non polymer #2
CL
InChI=1S/ClH/h1H/p-1
InChI=1S/ClH/h1H/p-1
SMILES: [Cl-]
[Cl-]
Non polymer #3
EDO
InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2
InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2
SMILES: C(CO)O
C(CO)O
Non polymer #4
EPE
InChI=1S/C8H18N2O4S/c11-7-5-9-1-3-10(4-2-9)6-8-15(12,13)14/h11H,1-8H2,(H,12,13,14)
InChI=1S/C8H18N2O4S/c11-7-5-9-1-3-10(4-2-9)6-8-15(12,13)14/h11H,1-8H2,(H,12,13,14)
SMILES: C1CN(CCN1CCO)CCS(=O)(=O)O
C1CN(CCN1CCO)CCS(=O)(=O)O
Non polymer #5
MG
InChI=1S/Mg/q+2
InChI=1S/Mg/q+2
SMILES: [Mg+2]
[Mg+2]
Non polymer #6
NA
InChI=1S/Na/q+1
InChI=1S/Na/q+1
SMILES: [Na+]
[Na+]
Non polymer #7
O4B
InChI=1S/C12H24O6/c1-2-14-5-6-16-9-10-18-12-11-17-8-7-15-4-3-13-1/h1-12H2
InChI=1S/C12H24O6/c1-2-14-5-6-16-9-10-18-12-11-17-8-7-15-4-3-13-1/h1-12H2
SMILES: C1COCCOCCOCCOCCOCCO1
C1COCCOCCOCCOCCOCCO1
Non polymer #8
PEG
InChI=1S/C4H10O3/c5-1-3-7-4-2-6/h5-6H,1-4H2
InChI=1S/C4H10O3/c5-1-3-7-4-2-6/h5-6H,1-4H2
SMILES: C(COCCO)O
C(COCCO)O
Biounit #1
homo-dimer
Download coordinates
Tube
Model
Reference
100%