2026-02-07_00000108
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ligand
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9O25
Heparanase P6 in complex with fragment J41;
X-ray diffraction 1.65Å
Protein #1
382 residues (100% resolved)
Raw Sequence ...
KNSTYSRSSVDVLYTFAKCSGLDLIFGLNALLRTSDGQWNSSNAQLLLDYCASKGYNIDWELGNEPNSFRKKAGIFINGSQLGKDFIHLHKLLRKSTFKNAKLYGPDVGQPRGKTAKMLKSFLKAGGEVIDAVTWHHYYLNGRTATLEDFLNPDVLDTFISQVQKVLQVVESTRPGKKVWLGETSSAYGGGAPGLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDENFDPLPDYWLSLLFKKLVGTKVLMASVQGQDRRKLRVYLHCTNTDNPRYKEGDLTLYAINLHNVTKYLRLPYPFSNKQVDQYLLRPHGPDGLLSKSVQLNGQTLKMVDDQTLPPLKPKPLRPGSSLGLPAFSYAFFVIRNAKVPAC
Canonical Sequence ...
KNSTYSRSSVDVLYTFAKCSGLDLIFGLNALLRTSDGQWNSSNAQLLLDYCASKGYNIDWELGNEPNSFRKKAGIFINGSQLGKDFIHLHKLLRKSTFKNAKLYGPDVGQPRGKTAKMLKSFLKAGGEVIDAVTWHHYYLNGRTATLEDFLNPDVLDTFISQVQKVLQVVESTRPGKKVWLGETSSAYGGGAPGLSDTFAAGFMWLDKLGLSARMGIEVVMRQVFFGAGNYHLVDENFDPLPDYWLSLLFKKLVGTKVLMASVQGQDRRKLRVYLHCTNTDNPRYKEGDLTLYAINLHNVTKYLRLPYPFSNKQVDQYLLRPHGPDGLLSKSVQLNGQTLKMVDDQTLPPLKPKPLRPGSSLGLPAFSYAFFVIRNAKVPAC
Protein #2
74 residues (100% resolved)
Raw Sequence ...
QDVVDLDFFTQEPLHLVSPSFLSVTIDANLATDPRFLILLGSPKLRTLARGLSPAYLRFGGTKTDFLIFDPKKE
Canonical Sequence ...
QDVVDLDFFTQEPLHLVSPSFLSVTIDANLATDPRFLILLGSPKLRTLARGLSPAYLRFGGTKTDFLIFDPKKE
Non polymer #3
46L
InChI=1S/C8H10N2O2/c1-10(2)7-4-3-6(5-9-7)8(11)12/h3-5H,1-2H3,(H,11,12)
InChI=1S/C8H10N2O2/c1-10(2)7-4-3-6(5-9-7)8(11)12/h3-5H,1-2H3,(H,11,12)
SMILES: CN(C)c1ccc(cn1)C(=O)O
CN(C)c1ccc(cn1)C(=O)O
Non polymer #4
ACT
InChI=1S/C2H4O2/c1-2(3)4/h1H3,(H,3,4)/p-1
InChI=1S/C2H4O2/c1-2(3)4/h1H3,(H,3,4)/p-1
SMILES: CC(=O)[O-]
CC(=O)[O-]
Non polymer #5
EDO
InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2
InChI=1S/C2H6O2/c3-1-2-4/h3-4H,1-2H2
SMILES: C(CO)O
C(CO)O
Non polymer #6
PEG
InChI=1S/C4H10O3/c5-1-3-7-4-2-6/h5-6H,1-4H2
InChI=1S/C4H10O3/c5-1-3-7-4-2-6/h5-6H,1-4H2
SMILES: C(COCCO)O
C(COCCO)O
Biounit #1
hetero-1-1-mer
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Model
Reference
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