2026-01-17_00000348|hard|9RN6

Crystal structure of a protein mimic of SARS-CoV-2 spike's HR1 domain in complex with two nanobodies bound to different epitopes; X-ray diffraction 2.40Å
Protein #1 241 residues (87% resolved)

MDVLYENQKLIANKFNSAIGKIQDSLSSTASELGKLQDEVNQNAQDLNTLVKQLSSNFGRISSELNDILSRLDKGEPAKDLRSDIDNLESKIAGFNSSLQKVLTNLAQKNQNVEDKLKGLESRTSSLEKQIKGIASNFQNEILKQREYLVNKGSGNVLYENQKLIENQFNSAIGKIQDSLSSTKSALGKLKDVVNQNKQALNTLVKQLSSNFGAISSVLNDIKSRLDKVEGGGGSHHHHHH

MDVLYENQKLIANKFNSAIGKIQDSLSSTASELGKLQDEVNQNAQDLNTLVKQLSSNFGRISSELNDILSRLDKGEPAKDLRSDIDNLESKIAGFNSSLQKVLTNLAQKNQNVEDKLKGLESRTSSLEKQIKGIASNFQNEILKQREYLVNKGSGNVLYENQKLIENQFNSAIGKIQDSLSSTKSALGKLKDVVNQNKQALNTLVKQLSSNFGAISSVLNDIKSRLDKVEGGGGSHHHHHH
Protein #2 123 residues (98% resolved)

QVQLQESGGGLVQAGGSLRLSCAASGIAFSNNAMGWYRQAPGKQRELVANIITFGNTYYTDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCHTYGDSPERGYWGQGTQVTVSSHHHHHH

QVQLQESGGGLVQAGGSLRLSCAASGIAFSNNAMGWYRQAPGKQRELVANIITFGNTYYTDSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCHTYGDSPERGYWGQGTQVTVSSHHHHHH
Protein #3 138 residues (89% resolved)

QVQLQESGGGLVHPGQSLTLSCAPSGRTFSNYDIGWFRQAPGKEREFVADIRLNSGSTYYADSVKGRFTISRDNVKNTVYLQMNSLKPEDTAVYYCAARSPGGILYDYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH

QVQLQESGGGLVHPGQSLTLSCAPSGRTFSNYDIGWFRQAPGKEREFVADIRLNSGSTYYADSVKGRFTISRDNVKNTVYLQMNSLKPEDTAVYYCAARSPGGILYDYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH
Download coordinates
Reference