2026-01-10_00000351
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hard
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9MTD
[1T7-12] 3D DNA Double Crossover Motif with an Even Number of Half Turns between Junctions;
X-ray diffraction 2.58Å
DNA #1
9 bases
Raw Sequence ...
(DT)(DG)(DT)(DA)(DC)(DG)(DG)(DA)(DC)
Canonical Sequence ...
TGTACGGAC
DNA #2
14 bases
Raw Sequence ...
(DC)(DC)(DG)(DT)(DA)(DC)(DA)(DC)(DC)(DG)(DT)(DA)(DC)(DA)
Canonical Sequence ...
CCGTACACCGTACA
DNA #3
10 bases
Raw Sequence ...
(DG)(DA)(DC)(DC)(DG)(DT)(DA)(DC)(DG)(DG)
Canonical Sequence ...
GACCGTACGG
DNA #4
4 bases
Raw Sequence ...
(DT)(DC)(DG)(DT)
Canonical Sequence ...
TCGT
DNA #5
3 bases
Raw Sequence ...
(DG)(DA)(DC)
Canonical Sequence ...
GAC
DNA #6
5 bases
Raw Sequence ...
(DT)(DC)(DG)(DT)(DG)
Canonical Sequence ...
TCGTG
DNA #7
2 bases
Raw Sequence ...
(DA)(DC)
Canonical Sequence ...
AC
Non polymer #8
DG
InChI=1S/C10H14N5O7P/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(22-6)2-21-23(18,19)20/h3-6,16H,1-2H2,(H2,18,19,20)(H3,11,13,14,17)/t4-,5+,6+/m0/s1
InChI=1S/C10H14N5O7P/c11-10-13-8-7(9(17)14-10)12-3-15(8)6-1-4(16)5(22-6)2-21-23(18,19)20/h3-6,16H,1-2H2,(H2,18,19,20)(H3,11,13,14,17)/t4-,5+,6+/m0/s1
SMILES: c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O)N=C(NC2=O)N
c1nc2c(n1[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O)N=C(NC2=O)N
Non polymer #9
MG
InChI=1S/Mg/q+2
InChI=1S/Mg/q+2
SMILES: [Mg+2]
[Mg+2]
Biounit #1
hetero-1-1-1-1-1-1-1-mer
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Model
Reference
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