2025-12-27_00000059|hard|9MCC

Cryo-EM structure of violaxanthin-chlorophyll-a-binding protein with red shifted Chl a (rVCP) from Trachydiscus minutus at 2.4 angstrom; Electron microscopy 2.42Å
Protein #1 229 residues (75% resolved)

SDNTRTLPDRENSCPGLLLLLLPIMKTAIALLPFLGAATAFVTPMSKTSMARGRSLQMSFDDEAGAIQWFPPSPGYWDPLGFVADGDTEKFSKYRAIEIKHGRVAMLGALDYFIKTPSGWHLPGKLGDVDIDSIPVGLGAIKAVPPLGWVQILLFASALEFLAPQKEDQPPGAVQPATPSFEQPGTLEYQTKEINNGRLAMIALAGLWLGELASGGTDPIVAFKTWVGI

SDNTRTLPDRENSCPGLLLLLLPIMKTAIALLPFLGAATAFVTPMSKTSMARGRSLQMSFDDEAGAIQWFPPSPGYWDPLGFVADGDTEKFSKYRAIEIKHGRVAMLGALDYFIKTPSGWHLPGKLGDVDIDSIPVGLGAIKAVPPLGWVQILLFASALEFLAPQKEDQPPGAVQPATPSFEQPGTLEYQTKEINNGRLAMIALAGLWLGELASGGTDPIVAFKTWVGI
Protein #2 221 residues (81% resolved)

MVAKSAALVVMGLSMASAFLAPTPNNRASAQAPMKMAKSAATKEFPFDDQPGGVKWFPSSAPYWDPLGFTNEKTEDEYWRIAHGEIKNGRLAMLAVTHYFVVGSGLRFPFKFGSVSTADVPLGLGAIKALPWAVWLQIAAFCLVLEVLTENPGFGERVPGRVPGNLQPDTPSFNAPGDLEIRTKELNNARLAMISIWGLWVGEIASGGVDPFTSFANWLKL

MVAKSAALVVMGLSMASAFLAPTPNNRASAQAPMKMAKSAATKEFPFDDQPGGVKWFPSSAPYWDPLGFTNEKTEDEYWRIAHGEIKNGRLAMLAVTHYFVVGSGLRFPFKFGSVSTADVPLGLGAIKALPWAVWLQIAAFCLVLEVLTENPGFGERVPGRVPGNLQPDTPSFNAPGDLEIRTKELNNARLAMISIWGLWVGEIASGGVDPFTSFANWLKL
Non polymer #3 A1L1F

InChI=1S/C50H72O7/c1-12-13-14-15-16-27-45(53)55-36-41(30-31-50-47(8,9)32-42(52)33-49(50,11)57-50)26-20-25-38(3)22-18-17-21-37(2)23-19-24-39(4)28-29-44-46(6,7)34-43(56-40(5)51)35-48(44,10)54/h17-26,28,30-31,42-43,52,54H,12-16,27,32-36H2,1-11H3/b18-17+,23-19+,25-20+,31-30+,37-21+,38-22+,39-24+,41-26-/t29-,42-,43-,48+,49+,50-/m0/s1

CCCCCCCC(=O)OC/C(=C\C=C\C(=C\C=C\C=C(/C)\C=C\C=C(/C)\C=C=C1[C@](C[C@H](CC1(C)C)OC(=O)C)(C)O)\C)/C=C/[C@]23[C@](O2)(C[C@H](CC3(C)C)O)C
Non polymer #4 CLA

InChI=1S/C55H73N4O5.Mg/c1-13-39-35(8)42-28-44-37(10)41(24-25-48(60)64-27-26-34(7)23-17-22-33(6)21-16-20-32(5)19-15-18-31(3)4)52(58-44)50-51(55(62)63-12)54(61)49-38(11)45(59-53(49)50)30-47-40(14-2)36(9)43(57-47)29-46(39)56-42;/h13,26,28-33,37,41,51H,1,14-25,27H2,2-12H3,(H-,56,57,58,59,61);/q-1;+2/p-1/b34-26+;/t32-,33-,37+,41+,51-;/m1./s1

CCC1=C(C2=Cc3c(c(c4n3[Mg]56[N]2=C1C=C7N5C8=C([C@H](C(=O)C8=C7C)C(=O)OC)C9=[N]6C(=C4)[C@H]([C@@H]9CCC(=O)OC/C=C(\C)/CCC[C@H](C)CCC[C@H](C)CCCC(C)C)C)C)C=C)C
Non polymer #5 XAT

InChI=1S/C40H56O4/c1-29(17-13-19-31(3)21-23-39-35(5,6)25-33(41)27-37(39,9)43-39)15-11-12-16-30(2)18-14-20-32(4)22-24-40-36(7,8)26-34(42)28-38(40,10)44-40/h11-24,33-34,41-42H,25-28H2,1-10H3/b12-11+,17-13+,18-14+,23-21+,24-22+,29-15+,30-16+,31-19+,32-20+/t33-,34-,37+,38+,39-,40-/m0/s1

C/C(=C\C=C\C=C(\C=C\C=C(\C=C\[C@@]12O[C@@]1(C[C@H](CC2(C)C)O)C)/C)/C)/C=C/C=C(/C=C/[C@@]34O[C@@]3(C[C@H](CC4(C)C)O)C)\C
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Reference