2025-12-20_00000001
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ligand
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8ZNN
X-ray structure of human PPAR delta ligand binding domain in complex with a synthetic agonist 16a;
X-ray diffraction 1.95Å
Protein #1
270 residues (96% resolved)
Raw Sequence ...
VADLKAFSKHIYNAYLKNFNMTKKKARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVETVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTREFLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQDTILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQEIYKDMY
Canonical Sequence ...
VADLKAFSKHIYNAYLKNFNMTKKKARSILTGKASHTAPFVIHDIETLWQAEKGLVWKQLVNGLPPYKEISVHVFYRCQCTTVETVRELTEFAKSIPSFSSLFLNDQVTLLKYGVHEAIFAMLASIVNKDGLLVANGSGFVTREFLRSLRKPFSDIIEPKFEFAVKFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQDTILRALEFHLQANHPDAQYLFPKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQEIYKDMY
Non polymer #2
A1D86
InChI=1S/C27H25F3N2O4/c28-27(29,30)36-21-15-13-19(14-16-21)26-31-22-9-4-5-10-23(22)32(26)18-20-8-3-6-11-24(20)35-17-7-1-2-12-25(33)34/h3-6,8-11,13-16H,1-2,7,12,17-18H2,(H,33,34)
InChI=1S/C27H25F3N2O4/c28-27(29,30)36-21-15-13-19(14-16-21)26-31-22-9-4-5-10-23(22)32(26)18-20-8-3-6-11-24(20)35-17-7-1-2-12-25(33)34/h3-6,8-11,13-16H,1-2,7,12,17-18H2,(H,33,34)
SMILES: c1ccc(c(c1)Cn2c3ccccc3nc2c4ccc(cc4)OC(F)(F)F)OCCCCCC(=O)O
c1ccc(c(c1)Cn2c3ccccc3nc2c4ccc(cc4)OC(F)(F)F)OCCCCCC(=O)O
Biounit #1
homo-dimer
Download coordinates
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Model
Reference
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