2025-11-15_00000164|hard|9LD0

Inactivate TOD6 with CC DNA substrate; Electron microscopy 3.17Å
DNA #1 31 bases

(DT)(DG)(DT)(DC)(DA)(DG)(DG)(DA)(DT)(DA)(DC)(DT)(DC)(DC)(DT)(DC)(DA)(DA)(DT)(DC)(DT)(DA)(DC)(DC)(DG)(DG)(DG)(DC)(DG)(DA)(DG)

TGTCAGGATACTCCTCAATCTACCGGGCGAG
DNA #2 31 bases

(DC)(DT)(DC)(DG)(DC)(DC)(DC)(DG)(DG)(DT)(DA)(DG)(DA)(DT)(DT)(DG)(DA)(DG)(DG)(DA)(DG)(DT)(DA)(DT)(DC)(DC)(DT)(DG)(DA)(DC)(DA)

CTCGCCCGGTAGATTGAGGAGTATCCTGACA
Protein #3 886 residues (94% resolved)

MASSHHHHHHHHSGASVDLRTLGYSQQQQEKIKPKVRSTVAQHHEALVGHGFTHAHIVALSQHPAALGTVAVKYQDMIAALPEATHEAIVGVGKQWSGARALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVHAWRNALTGAPLNLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGRPALEALHAVLTDGPEEAKYEALMRLGGALAIRISDNSEKQINTAINLIKNHAKSKGVELSEEDIKKVEKILKENPGVVLLLTPSGKIHVFPSISWSLPEYDGTTTHGVLVLDDGTQIGFTSGNGDPRYTNYRNNGHVAQKSALYMRENNISNATVYHNNTNGTCGYCNTMTATFLPEGATLTVVPPENAVANNSRAIDYVKTYTGTSN

MASSHHHHHHHHSGASVDLRTLGYSQQQQEKIKPKVRSTVAQHHEALVGHGFTHAHIVALSQHPAALGTVAVKYQDMIAALPEATHEAIVGVGKQWSGARALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVHAWRNALTGAPLNLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGRPALEALHAVLTDGPEEAKYEALMRLGGALAIRISDNSEKQINTAINLIKNHAKSKGVELSEEDIKKVEKILKENPGVVLLLTPSGKIHVFPSISWSLPEYDGTTTHGVLVLDDGTQIGFTSGNGDPRYTNYRNNGHVAQKSALYMRENNISNATVYHNNTNGTCGYCNTMTATFLPEGATLTVVPPENAVANNSRAIDYVKTYTGTSN
Non polymer #4 ZN

InChI=1S/Zn/q+2

[Zn+2]
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Reference