2025-10-04_00000032
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medium
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9C7S
Cryo EM structure of SARS-COV-2 (BQ 1.1) RBD in complex with Fab COV2-3891 (local refine);
Electron microscopy 4.00Å
Protein #1
268 residues (100% resolved)
Raw Sequence ...
PTESIVRFPNITNLCPFDEVFNATTFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSTVGGNYNYRYRLFRKSKLKPFERDISTEIYQAGNKPCNGVAGVNCYFPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITP
Canonical Sequence ...
PTESIVRFPNITNLCPFDEVFNATTFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSTVGGNYNYRYRLFRKSKLKPFERDISTEIYQAGNKPCNGVAGVNCYFPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITP
Protein #2
116 residues (100% resolved)
Raw Sequence ...
QVLLVQSGAEVKKPGASVKVSCKASGYTFTNNHLNWLRQAPGQGREWMGIIDPRSGGSSLAQKFQGRVTMTSVTSTNTVYMEMVSLKSEDTAVYYCARGGSKWYEGFDNWGQGTLV
Canonical Sequence ...
QVLLVQSGAEVKKPGASVKVSCKASGYTFTNNHLNWLRQAPGQGREWMGIIDPRSGGSSLAQKFQGRVTMTSVTSTNTVYMEMVSLKSEDTAVYYCARGGSKWYEGFDNWGQGTLV
Protein #3
107 residues (100% resolved)
Raw Sequence ...
VLTQAPSASGTPGQRATISCSGSYSNIGNNNVYWYQQLPETAPKLLIYNNDQRPSGVPDRFSASKSGTSASLAISGLRSEDEAEYFCAAWNNGLSGSNWVFGGGTQL
Canonical Sequence ...
VLTQAPSASGTPGQRATISCSGSYSNIGNNNVYWYQQLPETAPKLLIYNNDQRPSGVPDRFSASKSGTSASLAISGLRSEDEAEYFCAAWNNGLSGSNWVFGGGTQL
Non polymer #4
NAG
InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6-,7-,8-/m1/s1
InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6-,7-,8-/m1/s1
SMILES: CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O
CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O
Biounit #1
hetero-1-1-1-mer
Download coordinates
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Model
Reference
100%