2025-09-20_00000202|medium|9Q3K

Structure of LarA-like nickel-pincer nucleotide cofactor-utilizing enzyme with a single catalytic histidine residue from Streptococcus plurextorum; Electron microscopy 2.20Å
Protein #1 498 residues (96% resolved)

MKIDFEYGHGTMTADLPDTTDIFIPGETVADPECLPEDQIEAATLDSIRNPLGMPPLTELAKPGSKVTIVFPDRVKGGEQATAHRKVSIKLILQELYSVGVKKEDILLICSNGLHRKNTEKEILGVLGPDLYHQFAPTGQIINHDSEDYEHLVDLGKTKQGDPVIMNKYVYESDVAILIGHTQGNPYGGYSGGYKHCSTGITHWKSIASHHVPKVMHRKDFVPVNNNSLMRHKFDEIGMHMEEKMGKKFFCCDAVLDTKSRQIEINSGAADEVQKKAWKLGNARTYVPFAEKKYDIIVFGMPQFFHYGDGMGTNPIMLMQALSAQVIRHKRIMSDNCVFICASTCNGYFNESLWPYLPELYDLFQKEGNTLVDLNQYGEYFATNEEYIRKYRYAHAFHPFHGFSMISCAHLAEKHTAAIYLVGAEKPGYARGMGLKTRATFEEALEDAKKKFVGQEPNILALPKAFKTAAVHLMMKNDLPPMTPRYEENHWSHPQFEK

MKIDFEYGHGTMTADLPDTTDIFIPGETVADPECLPEDQIEAATLDSIRNPLGMPPLTELAKPGSKVTIVFPDRVKGGEQATAHRKVSIKLILQELYSVGVKKEDILLICSNGLHRKNTEKEILGVLGPDLYHQFAPTGQIINHDSEDYEHLVDLGKTKQGDPVIMNKYVYESDVAILIGHTQGNPYGGYSGGYKHCSTGITHWKSIASHHVPKVMHRKDFVPVNNNSLMRHKFDEIGMHMEEKMGKKFFCCDAVLDTKSRQIEINSGAADEVQKKAWKLGNARTYVPFAEKKYDIIVFGMPQFFHYGDGMGTNPIMLMQALSAQVIRHKRIMSDNCVFICASTCNGYFNESLWPYLPELYDLFQKEGNTLVDLNQYGEYFATNEEYIRKYRYAHAFHPFHGFSMISCAHLAEKHTAAIYLVGAEKPGYARGMGLKTRATFEEALEDAKKKFVGQEPNILALPKAFKTAAVHLMMKNDLPPMTPRYEENHWSHPQFEK
Non polymer #2 4EY

InChI=1S/C12H14NO8PS2/c14-9-8(4-20-22(17,18)19)21-11(10(9)15)13-2-6(5-23)1-7(3-13)12(16)24/h1-3,5,8-11,14-15H,4H2,(H2-,16,17,18,19,24)/p+1/t8-,9-,10-,11-/m1/s1

c1c(c[n+](cc1C(=O)S)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O)C=S
Non polymer #3 NI

InChI=1S/Ni/q+2

[Ni+2]
Download coordinates
Reference