2025-09-13_00000098|hard|9JO8

Cryo-EM structure of the mono-DdCBE bound to a dsDNA substrate.; Electron microscopy 3.00Å
Protein #1 679 residues (94% resolved)

MGSSDIADLRTLGYSQQQQEKIKPKVRSTVAQHHEALVGHGFTHAHIVALSQHPAALGTVAVKYQDMIAALPEATHEAIVGVGKQWSGARALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVHAWRNALTGAPLNLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALESIVAQLSRPDPALAALTNDHLVALACLGGRPALDAVKKGLG

MGSSDIADLRTLGYSQQQQEKIKPKVRSTVAQHHEALVGHGFTHAHIVALSQHPAALGTVAVKYQDMIAALPEATHEAIVGVGKQWSGARALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVHAWRNALTGAPLNLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNNGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASNGGGKQALESIVAQLSRPDPALAALTNDHLVALACLGGRPALDAVKKGLG
DNA #2 33 bases

(DG)(DA)(DA)(DT)(DC)(DT)(DA)(DG)(DC)(DC)(DT)(DA)(DG)(DC)(DC)(DG)(DT)(DT)(DT)(DC)(DC)(DT)(DG)(DA)(DT)(DC)(DA)(DA)(DA)(DT)(DA)(DT)(DC)

GAATCTAGCCTAGCCGTTTCCTGATCAAATATC
DNA #3 33 bases

(DG)(DA)(DT)(DA)(DT)(DT)(DT)(DG)(DA)(DT)(DC)(DA)(DG)(DG)(DA)(DA)(DA)(DC)(DG)(DG)(DC)(DT)(DA)(DG)(DG)(DC)(DT)(DA)(DG)(DA)(DT)(DT)(DC)

GATATTTGATCAGGAAACGGCTAGGCTAGATTC
Protein #4 133 residues (100% resolved)

GSYALGPYQISAPQLPAYNGQTVGTFYYVNDAGGLEGKVFISGGPTPYPNYVSAGHVESQSALFMRDNGISEGLVFHNNPKGTCGFCVNMIETLLPENAKMTVVPPEGVIPVKRGATGETKVFIGNSNGPKSP

GSYALGPYQISAPQLPAYNGQTVGTFYYVNDAGGLEGKVFISGGPTPYPNYVSAGHVESQSALFMRDNGISEGLVFHNNPKGTCGFCVNMIETLLPENAKMTVVPPEGVIPVKRGATGETKVFIGNSNGPKSP
Non polymer #5 ZN

InChI=1S/Zn/q+2

[Zn+2]
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Reference