2025-07-26_00000221|hard|9MLA

Pre-fusion HERV-K Envelope Protein Trimer Ectodomain in complex with Kenv-6 Fab; Electron microscopy 2.24Å
Protein #1 369 residues (98% resolved)

AAANYTYWAYVPFPPLIRAVTWMDNPIEVYVNDSVWVPGPIDDRCPAKPEEEGMMINISIGYRYPPICLGRAPGCLMPAVQNWLVEVPTVSPISRFTYHMVSGMSLRPRVNYLQDFSYQRSLKFRPKGKPCPKEIPKESKNTEVLVWEECVANSAVILQNNEFGTIIDWAPRGQFYHNCSGQTQSCPSAQVSPAVDSDLTESLDKHKHKKLQSFYPWEWGEKGISTPRPKIISPVSGPEHPELWRLTVASHHIRIWSGNQTLETRDRKPFYTVDLNSSLTVPLQSCVKPPYMLVVGNIVIKPDSQTITCENCRLLTCIDSTFNWQHRILLVRAREGVWIPCSMDRPWEASPSIHILTEVLKGVLNRRRR

AAANYTYWAYVPFPPLIRAVTWMDNPIEVYVNDSVWVPGPIDDRCPAKPEEEGMMINISIGYRYPPICLGRAPGCLMPAVQNWLVEVPTVSPISRFTYHMVSGMSLRPRVNYLQDFSYQRSLKFRPKGKPCPKEIPKESKNTEVLVWEECVANSAVILQNNEFGTIIDWAPRGQFYHNCSGQTQSCPSAQVSPAVDSDLTESLDKHKHKKLQSFYPWEWGEKGISTPRPKIISPVSGPEHPELWRLTVASHHIRIWSGNQTLETRDRKPFYTVDLNSSLTVPLQSCVKPPYMLVVGNIVIKPDSQTITCENCRLLTCIDSTFNWQHRILLVRAREGVWIPCSMDRPWEASPSIHILTEVLKGVLNRRRR
Protein #2 253 residues (61% resolved)

FIFTLIAVIMGLIAVTATAAVAGVALHSSVQSCNFVNDWQKNSTRLWNSQSSIDQKLANQINDLRQTVIWMGDRLMSLEHRFQLQCDWNTSDFCITPQIYNESEHHWDMVRRHLQGREDNLTLDISKLKEQIFEASKAHLNLVPGTEAIAGVADGLANLNPVTWVKTDDDDKAGGSGGSGGSGGGYIPEAPRDGQAYVRKDGEWVLLSTFLASGLEVLFQGPGAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK

FIFTLIAVIMGLIAVTATAAVAGVALHSSVQSCNFVNDWQKNSTRLWNSQSSIDQKLANQINDLRQTVIWMGDRLMSLEHRFQLQCDWNTSDFCITPQIYNESEHHWDMVRRHLQGREDNLTLDISKLKEQIFEASKAHLNLVPGTEAIAGVADGLANLNPVTWVKTDDDDKAGGSGGSGGSGGGYIPEAPRDGQAYVRKDGEWVLLSTFLASGLEVLFQGPGAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK
Protein #3 119 residues (100% resolved)

QIQLVQSGPELKKPGETVKISCKASGYTFTIYGMNWLKQAPGKGLKWMGWINTYTGEPTYADDFKGRFAFSLETSASTAYLQVNNLKNEDTATYFCAKYYDGYYGWYFDVWGAGTTLTV

QIQLVQSGPELKKPGETVKISCKASGYTFTIYGMNWLKQAPGKGLKWMGWINTYTGEPTYADDFKGRFAFSLETSASTAYLQVNNLKNEDTATYFCAKYYDGYYGWYFDVWGAGTTLTV
Protein #4 107 residues (100% resolved)

IVLTQSPASLAVTLGQRATISCRGSESVDSYGNSFMHWYQQKPGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQSYEDPYTFGGGTKL

IVLTQSPASLAVTLGQRATISCRGSESVDSYGNSFMHWYQQKPGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQSYEDPYTFGGGTKL
Non polymer #5 NAG

InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6-,7-,8-/m1/s1

CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O
Download coordinates
Reference