2025-07-26_00000038
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ligand
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9E0Q
CryoEM structure of inducible Lysine decarboxylase from Hafnia alvei D-hydrazino-Lysine analog at 2.3 Angstrom resolution;
Electron microscopy 2.30Å
Protein #1
710 residues (100% resolved)
Raw Sequence ...
MNIIAILNHMGVYFKEEPIRELHKALEALDFQIVYPNDREDLLKLIDNNARLCGVIFDWDTYNLDLCEEISAMNEHLPVYAFANTHSTLDVSLNDLRLNVEFFEYALGAAQDIAQKIRQSTDAYIDEILPPLTKALFNYVKEGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGANAMKSDISISVGELGSLLDHSGPHKEAEEYIARTFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPKSEFQHDTIAERVAQTPNATWPVHAVVTNSTYDGLLYNTDYIKEALDVKSIHFDSAWVPYTNFSPIYKGLCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTSTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIRFRKEIKRLNSESEGWFFDVWQPEGIDEAKCWPLDSKDNWHGFKDIDNDHMYLDPIKVTLLTPGMQKDGSMADTGIPASIVSKYLDEHGIIVEKTGPYNMLFLFSIGIDKTKALSLLRALTDFKRSYDLNLRVKNMLPSLYREDPEFYENMRIQELAQGIHALIQHHNLPDLMYRAFEVLPTMVMNPHAAFQMELRGQTEEVYLEEMIGKVNANMILPYPPGVPLVMPGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVIK
Canonical Sequence ...
MNIIAILNHMGVYFKEEPIRELHKALEALDFQIVYPNDREDLLKLIDNNARLCGVIFDWDTYNLDLCEEISAMNEHLPVYAFANTHSTLDVSLNDLRLNVEFFEYALGAAQDIAQKIRQSTDAYIDEILPPLTKALFNYVKEGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGANAMKSDISISVGELGSLLDHSGPHKEAEEYIARTFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPKSEFQHDTIAERVAQTPNATWPVHAVVTNSTYDGLLYNTDYIKEALDVKSIHFDSAWVPYTNFSPIYKGLCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTSTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIRFRKEIKRLNSESEGWFFDVWQPEGIDEAKCWPLDSKDNWHGFKDIDNDHMYLDPIKVTLLTPGMQKDGSMADTGIPASIVSKYLDEHGIIVEKTGPYNMLFLFSIGIDKTKALSLLRALTDFKRSYDLNLRVKNMLPSLYREDPEFYENMRIQELAQGIHALIQHHNLPDLMYRAFEVLPTMVMNPHAAFQMELRGQTEEVYLEEMIGKVNANMILPYPPGVPLVMPGEMLTEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVIK
Non polymer #2
A1BD0
InChI=1S/C14H23N4O7P/c1-9-13(19)11(10(6-16-9)8-25-26(22,23)24)7-17-18-12(14(20)21)4-2-3-5-15/h6-7,12,18-19H,2-5,8,15H2,1H3,(H,20,21)(H2,22,23,24)
InChI=1S/C14H23N4O7P/c1-9-13(19)11(10(6-16-9)8-25-26(22,23)24)7-17-18-12(14(20)21)4-2-3-5-15/h6-7,12,18-19H,2-5,8,15H2,1H3,(H,20,21)(H2,22,23,24)
SMILES: Cc1c(c(c(cn1)COP(=O)(O)O)/C=N/N[C@H](CCCCN)C(=O)O)O
Cc1c(c(c(cn1)COP(=O)(O)O)/C=N/N[C@H](CCCCN)C(=O)O)O
Biounit #1
homo-10-mer
Download coordinates
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Model
Reference
100%