2025-07-12_00000149
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medium
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9IQP
Crystal structure of the Wuhan SARS-CoV-2 Spike RBD (319-541) complexed with 1p1B10 nanobody;
X-ray diffraction 1.55Å
Protein #1
235 residues (83% resolved)
Raw Sequence ...
RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFGSHHHHHHHHHH
Canonical Sequence ...
RVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFGSHHHHHHHHHH
Protein #2
150 residues (83% resolved)
Raw Sequence ...
QVQLQESGGGSVQAGGSLRLSCTPSGFTVHDSDMGWYRVKPGNECELVTTLFGDGDTYYADSVKDRFIISQDNAKNTVYLQMNNLKPEDTAKYHCVARGVGVYGMHWFCGEYNFAGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHHGS
Canonical Sequence ...
QVQLQESGGGSVQAGGSLRLSCTPSGFTVHDSDMGWYRVKPGNECELVTTLFGDGDTYYADSVKDRFIISQDNAKNTVYLQMNNLKPEDTAKYHCVARGVGVYGMHWFCGEYNFAGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHHGS
Non polymer #3
NA
InChI=1S/Na/q+1
InChI=1S/Na/q+1
SMILES: [Na+]
[Na+]
Non polymer #4
NAG
InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6-,7-,8-/m1/s1
InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6-,7-,8-/m1/s1
SMILES: CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O
CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O
Biounit #1
hetero-1-1-mer
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Model
Reference
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