2025-06-28_00000014|hard|8YS5

Cryo-EM structure of the Helicobacter pylori OorDABC complex in the apo-form; Electron microscopy 2.95Å
Protein #1 113 residues (94% resolved)

MAKMSTPDGVAVWVNEDRCKGCDICVSVCPAGVLGMGIEKERVLGKVAKVAYPESCIGCVQCELHCPDFAIYVADRKDFKFAKVSKEAQERSEKVKANKYMLLEETILEGRGK

MAKMSTPDGVAVWVNEDRCKGCDICVSVCPAGVLGMGIEKERVLGKVAKVAYPESCIGCVQCELHCPDFAIYVADRKDFKFAKVSKEAQERSEKVKANKYMLLEETILEGRGK
Protein #2 375 residues (100% resolved)

MREIISDGNELVAKAAIEVGCRFFGGYPITPSSDIMHAMSVALPKCGGHFIQMEDEISGISVSLGASMSGTKSMTASSGPGISLKVEQIGYSFMAEIPLVIADVMRSGPSTGMPTRVAQGDVNFLKHPIHGDFKAVALAPASLEEAYTETVRAFNLAEMLMTPVFLLMDETVGHMYGKVQIPDLEEVQKMTINRKEFVGDKKDYKPYGVAQDEPAVLNPFFKGYRYHVSGLHHGPIGFPTEDAKIGGDLIDRLFHKIESKQDIINENEEMDLEGAEIVIIAYGSVSLAVKEALKDYHKESKQKVGFFRPKTLWPSPAKRLKEIGDKYEKILVIELNKGQYLEEIERAMQRKVHFFGQANGRTISPKQIIAKLKEL

MREIISDGNELVAKAAIEVGCRFFGGYPITPSSDIMHAMSVALPKCGGHFIQMEDEISGISVSLGASMSGTKSMTASSGPGISLKVEQIGYSFMAEIPLVIADVMRSGPSTGMPTRVAQGDVNFLKHPIHGDFKAVALAPASLEEAYTETVRAFNLAEMLMTPVFLLMDETVGHMYGKVQIPDLEEVQKMTINRKEFVGDKKDYKPYGVAQDEPAVLNPFFKGYRYHVSGLHHGPIGFPTEDAKIGGDLIDRLFHKIESKQDIINENEEMDLEGAEIVIIAYGSVSLAVKEALKDYHKESKQKVGFFRPKTLWPSPAKRLKEIGDKYEKILVIELNKGQYLEEIERAMQRKVHFFGQANGRTISPKQIIAKLKEL
Protein #3 273 residues (100% resolved)

MAFNYDEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSYVNCNTVHTTHGRAVAYATGIKMANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFILVNNFIYGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCALTTAAGASFVARESVLDPQKLEKVLKEGFSHKGFSFFDVHSNCHINLGRKNKMGEASQMLKWMESRLVSKRQFEAMSPEERVDKFPTGVLRHDTDRKEYCEAYQEIIEKAQGKQ

MAFNYDEYLRVDKIPTLWCWGCGDGVILKSIIRTIDALGWKMDDVCLVSGIGCSGRMSSYVNCNTVHTTHGRAVAYATGIKMANPSKHVIVVSGDGDGFAIGGNHTMHACRRNIDLNFILVNNFIYGLTNSQTSPTTPNGMWTVTAQWGNIDNQFDPCALTTAAGASFVARESVLDPQKLEKVLKEGFSHKGFSFFDVHSNCHINLGRKNKMGEASQMLKWMESRLVSKRQFEAMSPEERVDKFPTGVLRHDTDRKEYCEAYQEIIEKAQGKQ
Protein #4 186 residues (99% resolved)

MEAQLRFTGVGGQGVLLAGEILAEAKIVSGGYGTKTSTYTSQVRGGPTKVDILLDKDEIIFPYAKEGEIDFMLSVAQISYNQFKSDIKQGGIVVIDPNLVTPTKEDEEKYQIYKIPIISIAKDEVGNIITQSVVALAITVELTKCVEENIVLDTMLKKVPAKVADTNKKAFEIGKKHALEALKVRA

MEAQLRFTGVGGQGVLLAGEILAEAKIVSGGYGTKTSTYTSQVRGGPTKVDILLDKDEIIFPYAKEGEIDFMLSVAQISYNQFKSDIKQGGIVVIDPNLVTPTKEDEEKYQIYKIPIISIAKDEVGNIITQSVVALAITVELTKCVEENIVLDTMLKKVPAKVADTNKKAFEIGKKHALEALKVRA
Non polymer #5 MG

InChI=1S/Mg/q+2

[Mg+2]
Non polymer #6 SF4

InChI=1S/4Fe.4S

[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
Non polymer #7 TPP

InChI=1S/C12H18N4O7P2S/c1-8-11(3-4-22-25(20,21)23-24(17,18)19)26-7-16(8)6-10-5-14-9(2)15-12(10)13/h5,7H,3-4,6H2,1-2H3,(H4-,13,14,15,17,18,19,20,21)/p+1

Cc1c(sc[n+]1Cc2cnc(nc2N)C)CCO[P@](=O)(O)OP(=O)(O)O
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Reference