2025-06-14_00000188
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medium
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9JMH
Cryo-EM structure of HKU25-BatCoV S-trimer stabilized with 2P and x1 disulfide bond;
Electron microscopy 3.00Å
Protein #1
1368 residues (82% resolved)
Raw Sequence ...
MTLSMFLLMFLLTHIKGDVDLGPDSSAQSCQEVDIQPQYFQKDWTKPIDPAKADGIIYPTGRSYSNITLSYQGLFPRQGDQGQLYLYSVSHADPNTGKMGPDGIGKLFISNYTNETNTFDNGFVVRIGDAANSSYPIIISPQGPARTIKKIYPAFMLGAYIGNFTNNRTVRYLNHTLVILPEGCGTSLSVFYCVLIPRTQHRCPEDNAYSSYVIWETPHQDCEGSTVNRNISLNAFKHYFNLTQCKFFYSYNITEDEHAEWFGITQDARGVHLYSSRKGDLYGGNMFLFASLPIYDTLKYYTVIPRSIRSKYNSRQGWAAFYIYKLHQLTYLLDFTVDGYIRRAVDCGHDDLAQLRCSYESFDVDSGVYSVSSFEAQPRGAFIEQSSGKECDFSPMLTGTPPQVYNFRRLVFTDCNYNLTKLLSLFQVSEFSCHQVCPDALASGCYSSLTVDYFAYPTSLASYLQQGSTGEITQYNYKQDFSNPTCRILATAPANITLTKPSNYNWLTQCYKGSAFGNQPHYVQTGQYTPCLGLAVQGFSAAYQSHRDPITKLVATGNIAAMTDNLQMAFIISVQYGTDTNSVCPMQALRNDTSVHDKLGQCIDYSLYGLTGRGVFQNCTAVGLSQQRFVYDGFDILTGYHSDDGNYYCVRPCVSVPLSVVYDKPSNNYATIFGSVACDYVNTMTTQLSRMTQAKLRSRSFTTPIQTAVGCVIGLVNSSLVVDDDKCTLPLGQSLCAVPSKNRDTTSNLQLAVINFTRPHLVEALNSSGFVVQIPTNFSFSITQEYIQTTIQKVTVDCKQYVCNGFEKCETLLREYGQFCAKINQALHGANLRQDESVANLFANIKTQTTQALDAGLNGDFNLTLLQVPKVTTSQYSYRSTIEDLLFNKVTIADPGYMQGYDECMQQGPPSARDLICAQFVAGYKVLPPLYDPNMEAAYTSSLLGSILGAGWTAGLSSFAAIPFAQSIFYRMNGIGITQQVLSENQKQIDKKFNQALNAMQTGFTTTNLAFSKVQDAVNANAQALAKLASELSNTFGAISSSISDILKRLCPPEQEAQIDRLINGRLTSLNAFVAQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVINAPDGLYFFHVGYVPTDHINATAAYGLCNNDNPPRCIAPIDGYFVRNSSTTRDANDEWYYTGSSYYNPEPISMANTRYVSQDTKFENLTTNIPPPLLNRTDSDFKDELEEFFKNVSSQGPNFAEISKINTTLLDLSTEMNALNEVVKQLNQSYIDLKELGNYSYYQKWPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLLEVLFQGPGHHHHHHHHSAWSHPQFEKGGGSGGGGSGGSAWSHPQFEKSA
Canonical Sequence ...
MTLSMFLLMFLLTHIKGDVDLGPDSSAQSCQEVDIQPQYFQKDWTKPIDPAKADGIIYPTGRSYSNITLSYQGLFPRQGDQGQLYLYSVSHADPNTGKMGPDGIGKLFISNYTNETNTFDNGFVVRIGDAANSSYPIIISPQGPARTIKKIYPAFMLGAYIGNFTNNRTVRYLNHTLVILPEGCGTSLSVFYCVLIPRTQHRCPEDNAYSSYVIWETPHQDCEGSTVNRNISLNAFKHYFNLTQCKFFYSYNITEDEHAEWFGITQDARGVHLYSSRKGDLYGGNMFLFASLPIYDTLKYYTVIPRSIRSKYNSRQGWAAFYIYKLHQLTYLLDFTVDGYIRRAVDCGHDDLAQLRCSYESFDVDSGVYSVSSFEAQPRGAFIEQSSGKECDFSPMLTGTPPQVYNFRRLVFTDCNYNLTKLLSLFQVSEFSCHQVCPDALASGCYSSLTVDYFAYPTSLASYLQQGSTGEITQYNYKQDFSNPTCRILATAPANITLTKPSNYNWLTQCYKGSAFGNQPHYVQTGQYTPCLGLAVQGFSAAYQSHRDPITKLVATGNIAAMTDNLQMAFIISVQYGTDTNSVCPMQALRNDTSVHDKLGQCIDYSLYGLTGRGVFQNCTAVGLSQQRFVYDGFDILTGYHSDDGNYYCVRPCVSVPLSVVYDKPSNNYATIFGSVACDYVNTMTTQLSRMTQAKLRSRSFTTPIQTAVGCVIGLVNSSLVVDDDKCTLPLGQSLCAVPSKNRDTTSNLQLAVINFTRPHLVEALNSSGFVVQIPTNFSFSITQEYIQTTIQKVTVDCKQYVCNGFEKCETLLREYGQFCAKINQALHGANLRQDESVANLFANIKTQTTQALDAGLNGDFNLTLLQVPKVTTSQYSYRSTIEDLLFNKVTIADPGYMQGYDECMQQGPPSARDLICAQFVAGYKVLPPLYDPNMEAAYTSSLLGSILGAGWTAGLSSFAAIPFAQSIFYRMNGIGITQQVLSENQKQIDKKFNQALNAMQTGFTTTNLAFSKVQDAVNANAQALAKLASELSNTFGAISSSISDILKRLCPPEQEAQIDRLINGRLTSLNAFVAQQLVRSETAARSAQLASDKVNECVKSQSKRNGFCGSGTHIVSFVINAPDGLYFFHVGYVPTDHINATAAYGLCNNDNPPRCIAPIDGYFVRNSSTTRDANDEWYYTGSSYYNPEPISMANTRYVSQDTKFENLTTNIPPPLLNRTDSDFKDELEEFFKNVSSQGPNFAEISKINTTLLDLSTEMNALNEVVKQLNQSYIDLKELGNYSYYQKWPGSGYIPEAPRDGQAYVRKDGEWVLLSTFLLEVLFQGPGHHHHHHHHSAWSHPQFEKGGGSGGGGSGGSAWSHPQFEKSA
Non polymer #2
EIC
InChI=1S/C18H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18(19)20/h6-7,9-10H,2-5,8,11-17H2,1H3,(H,19,20)/b7-6-,10-9-
InChI=1S/C18H32O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18(19)20/h6-7,9-10H,2-5,8,11-17H2,1H3,(H,19,20)/b7-6-,10-9-
SMILES: CCCCCC=C/CC=C/CCCCCCCC(=O)O
CCCCCC=C/CC=C/CCCCCCCC(=O)O
Non polymer #3
NAG
InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6-,7-,8-/m1/s1
InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6-,7-,8-/m1/s1
SMILES: CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O
CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O
Biounit #1
hetero-3-10-6-mer
Download coordinates
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Model
Reference
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