2025-05-17_00000245|ligand|9KSN

Crystal structure of meso-diaminopimelate dehydrogenase from Bacillus thermozeamaize mutant M9 complexed with NADP+; X-ray diffraction 2.65Å
Protein #1 347 residues (88% resolved)

MGSSHHHHHHSGIVPRGSHMASMTGGGQMGRGSEFELRRQMSEIRTERPIRVAIIGYGNIGQYALQAVEEAPDMELAGVVRRQSSLEKPLPRELHGVSVVSDVSALGQVDVAVLCTPTYETPAIAKELLARGIHTIDSFDIHQEIVQVRHELDEVARAHQAVAILAAGLLPGTCSMIRSILEFMAPYGITYTNVGPGMSMSASVAVKAIEGVKDALALIIPIGTGLHRRMVYVELEEGADFATVKERILQDPLFVHDETHVLQVDDVKQLIDRGIAVRMERKGVSGQTQNQLFTYEMRINNPALTSQVMIASARAAMRQKPGAYTMIEIPIIDFLYGDRDELIRRLV

MGSSHHHHHHSGIVPRGSHMASMTGGGQMGRGSEFELRRQMSEIRTERPIRVAIIGYGNIGQYALQAVEEAPDMELAGVVRRQSSLEKPLPRELHGVSVVSDVSALGQVDVAVLCTPTYETPAIAKELLARGIHTIDSFDIHQEIVQVRHELDEVARAHQAVAILAAGLLPGTCSMIRSILEFMAPYGITYTNVGPGMSMSASVAVKAIEGVKDALALIIPIGTGLHRRMVYVELEEGADFATVKERILQDPLFVHDETHVLQVDDVKQLIDRGIAVRMERKGVSGQTQNQLFTYEMRINNPALTSQVMIASARAAMRQKPGAYTMIEIPIIDFLYGDRDELIRRLV
Non polymer #2 ACY

InChI=1S/C2H4O2/c1-2(3)4/h1H3,(H,3,4)

CC(=O)O
Non polymer #3 IMD

InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5)/p+1

c1c[nH+]c[nH]1
Non polymer #4 NAP

InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1

c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
Non polymer #5 OXM

InChI=1S/C2H3NO3/c3-1(4)2(5)6/h(H2,3,4)(H,5,6)

C(=O)(C(=O)O)N
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Reference