2025-05-17_00000116|hard|9CU5

LJF-085 Fab in complex with HIV Env JRFL NFL TD CC3+ trimer and 35O22 Fab; Electron microscopy 3.40Å
Protein #1 131 residues (98% resolved)

QGQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSS

QGQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSS
Protein #2 114 residues (98% resolved)

QSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSK

QSVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSK
Protein #3 123 residues (98% resolved)

QVQLQESGPGLVKPSETLSLTCTVSGGSIDDYFWNWVRQPPGKPLECIGYIFGRGGGTKYNPSLDNRVTISTDTPNQFSLKLRSVTVADTAIYYCARWNLYDDDFGYNSFAVWGRGVLVTVSS

QVQLQESGPGLVKPSETLSLTCTVSGGSIDDYFWNWVRQPPGKPLECIGYIFGRGGGTKYNPSLDNRVTISTDTPNQFSLKLRSVTVADTAIYYCARWNLYDDDFGYNSFAVWGRGVLVTVSS
Protein #4 107 residues (99% resolved)

DIQMTQSPSSLSASVGDTVTITCQARHAVGKNLNWYQQKPGRGPQLLIYMASSRHSGVPSRFRGSGSGREFTLTINNLQPEDFATYSCQQGYTYPWTFGQGTKVEMK

DIQMTQSPSSLSASVGDTVTITCQARHAVGKNLNWYQQKPGRGPQLLIYMASSRHSGVPSRFRGSGSGREFTLTINNLQPEDFATYSCQQGYTYPWTFGQGTKVEMK
Protein #5 649 residues (88% resolved)

VEKLWVTVYYGVPVWKDAETTLFCASDAKAYDTEKHNVWATHACVPTDPNPQEVVLENVTEHFNMWKNNMVEQMQTDIISLWDQSLKPCVKLTPLCVTLNCKDVNATNTTNDSEGTMERGEIKNCSFNITTELRDKVQKVYALFYKLDVVPIDNNNTSYRLISCDTSVITQACPKISFEPIPIHYCAPAGFAILKCNDKTFNGKGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSDNFTNNAKTIIVQLKESVEINCTRPNNYTRKSIRIGPGRAFYTMGEIIGDIRQAHCNISRAKWNDTLKQIVIKLREQFENKTIVFNHSSGGDPEIVMHSFNCGGEFFYCNSTQLFNSTWNNNTEGSNNTEGNTITLPCRIKQIINMWQRVGQAMYAPPIRGQIRCSSNITGLLLTRDGGINENGTEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVQGGGGSGGGGSAVGIGAVRRGFLGAAGSTMGAASMTLTVQARNLLSGIVQPQSNLLRAPEAQQRMLQLGVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNASWSNKSLDRIWNNMTWMEWEREIDNYTSEIYTLIEESQNQQEKNEQELLCLDGGGGSHHHHHHHHGSGC

VEKLWVTVYYGVPVWKDAETTLFCASDAKAYDTEKHNVWATHACVPTDPNPQEVVLENVTEHFNMWKNNMVEQMQTDIISLWDQSLKPCVKLTPLCVTLNCKDVNATNTTNDSEGTMERGEIKNCSFNITTELRDKVQKVYALFYKLDVVPIDNNNTSYRLISCDTSVITQACPKISFEPIPIHYCAPAGFAILKCNDKTFNGKGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSDNFTNNAKTIIVQLKESVEINCTRPNNYTRKSIRIGPGRAFYTMGEIIGDIRQAHCNISRAKWNDTLKQIVIKLREQFENKTIVFNHSSGGDPEIVMHSFNCGGEFFYCNSTQLFNSTWNNNTEGSNNTEGNTITLPCRIKQIINMWQRVGQAMYAPPIRGQIRCSSNITGLLLTRDGGINENGTEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVQGGGGSGGGGSAVGIGAVRRGFLGAAGSTMGAASMTLTVQARNLLSGIVQPQSNLLRAPEAQQRMLQLGVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNASWSNKSLDRIWNNMTWMEWEREIDNYTSEIYTLIEESQNQQEKNEQELLCLDGGGGSHHHHHHHHGSGC
Non polymer #6 NAG

InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6-,7-,8-/m1/s1

CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O
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Reference