2025-05-17_00000061
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ligand
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8ZKA
Crystal structure of the Decarboxylase KDC4427 in complex with phenylpyruvic acid intermediate;
X-ray diffraction 1.95Å
Protein #1
566 residues (95% resolved)
Raw Sequence ...
MGSSHHHHHHSQDPMRTPYCVADYLLDRLTDCGADHLFGVPGDYNLQFLDHVIDSPDICWVGCANELNASYAADGYARCKGFAALLTTFGVGELSAMNGIAGSYAEHVPVLHIVGAPGTASQQRGELLHHTLGDGEFRHFYHMSEPITVAQAILTEQNACYEIDRVLTTMLRERRPGYLMLPADVAKKAATPPVNALTLRHAHADSACLKAFRDAAENRLAMSKRTALLADFLVLRHGLKHALQKWVKDVPMAHATMLMGKGIFDERHVGFYGTYSGSASAGAVKEAIEGADTVLCIGTRFTDTLTAGFTHQLTPSQTIEVQPHASRVGDVWFTGIPMLQAIETLVELCKQHVHDTPVPSSQSAMVYPQPDGSLTQDNFWKTLQTFIRPGDIILADQGTSAFGAIDLRLPADVNFIVQPLWGSIGYTLAAAFGAQTACPNRRVIVLTGDGAAQLTIQELGSMLRDKQHPIILVLNNEGYTVERAIHGPEQRYNDIALWNWTQIPQALSLDPQAQCWRVSEAEQLADVLEKVAHHERLSLIEVMLPKADIPPLLGAITKALEARNSA
Canonical Sequence ...
MGSSHHHHHHSQDPMRTPYCVADYLLDRLTDCGADHLFGVPGDYNLQFLDHVIDSPDICWVGCANELNASYAADGYARCKGFAALLTTFGVGELSAMNGIAGSYAEHVPVLHIVGAPGTASQQRGELLHHTLGDGEFRHFYHMSEPITVAQAILTEQNACYEIDRVLTTMLRERRPGYLMLPADVAKKAATPPVNALTLRHAHADSACLKAFRDAAENRLAMSKRTALLADFLVLRHGLKHALQKWVKDVPMAHATMLMGKGIFDERHVGFYGTYSGSASAGAVKEAIEGADTVLCIGTRFTDTLTAGFTHQLTPSQTIEVQPHASRVGDVWFTGIPMLQAIETLVELCKQHVHDTPVPSSQSAMVYPQPDGSLTQDNFWKTLQTFIRPGDIILADQGTSAFGAIDLRLPADVNFIVQPLWGSIGYTLAAAFGAQTACPNRRVIVLTGDGAAQLTIQELGSMLRDKQHPIILVLNNEGYTVERAIHGPEQRYNDIALWNWTQIPQALSLDPQAQCWRVSEAEQLADVLEKVAHHERLSLIEVMLPKADIPPLLGAITKALEARNSA
Non polymer #2
A1L14
InChI=1S/C20H26N4O8P2S/c1-13-18(8-9-31-34(29,30)32-33(26,27)28)35-20(17(25)10-15-6-4-3-5-7-15)24(13)12-16-11-22-14(2)23-19(16)21/h3-7,11,25H,8-10,12H2,1-2H3,(H,29,30)(H2,21,22,23)(H2,26,27,28)/b20-17+
InChI=1S/C20H26N4O8P2S/c1-13-18(8-9-31-34(29,30)32-33(26,27)28)35-20(17(25)10-15-6-4-3-5-7-15)24(13)12-16-11-22-14(2)23-19(16)21/h3-7,11,25H,8-10,12H2,1-2H3,(H,29,30)(H2,21,22,23)(H2,26,27,28)/b20-17+
SMILES: Cc1ncc(c(n1)N)CN2C(=C(S/C2=C(Cc3ccccc3)/O)CCOP(=O)(O)OP(=O)(O)O)C
Cc1ncc(c(n1)N)CN2C(=C(S/C2=C(Cc3ccccc3)/O)CCOP(=O)(O)OP(=O)(O)O)C
Non polymer #3
MG
InChI=1S/Mg/q+2
InChI=1S/Mg/q+2
SMILES: [Mg+2]
[Mg+2]
Biounit #1
homo-dimer
Download coordinates
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Model
Reference
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