2025-05-10_00000130
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ligand
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9BS8
Structure of the SARS-CoV-2 main protease in complex with inhibitor YR-B-107;
X-ray diffraction 1.70Å
Protein #1
306 residues (100% resolved)
Raw Sequence ...
SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ
Canonical Sequence ...
SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ
Non polymer #2
A1AR4
InChI=1S/C23H31N3O5/c27-13-18(11-17-7-10-24-20(17)28)25-21(29)19-12-23(8-4-9-23)15-26(19)22(30)31-14-16-5-2-1-3-6-16/h1-3,5-6,17-19,27H,4,7-15H2,(H,24,28)(H,25,29)/t17-,18+,19-/m0/s1
InChI=1S/C23H31N3O5/c27-13-18(11-17-7-10-24-20(17)28)25-21(29)19-12-23(8-4-9-23)15-26(19)22(30)31-14-16-5-2-1-3-6-16/h1-3,5-6,17-19,27H,4,7-15H2,(H,24,28)(H,25,29)/t17-,18+,19-/m0/s1
SMILES: c1ccc(cc1)COC(=O)N2CC3(CCC3)C[C@H]2C(=O)N[C@@H](C[C@@H]4CCNC4=O)CO
c1ccc(cc1)COC(=O)N2CC3(CCC3)C[C@H]2C(=O)N[C@@H](C[C@@H]4CCNC4=O)CO
Biounit #1
homo-dimer
Download coordinates
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Model
Reference
100%