2025-05-10_00000120
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ligand
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9BQP
Structure of the SARS-CoV-2 main protease in complex with inhibitor R79;
X-ray diffraction 2.00Å
Protein #1
306 residues (100% resolved)
Raw Sequence ...
SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ
Canonical Sequence ...
SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ
Non polymer #2
A1ARN
InChI=1S/C25H42N4O6/c1-13(2)35-23(34)28-19(24(3,4)5)22(33)29-11-16-17(25(16,6)7)18(29)21(32)27-15(12-30)10-14-8-9-26-20(14)31/h13-19,30H,8-12H2,1-7H3,(H,26,31)(H,27,32)(H,28,34)/t14-,15+,16-,17-,18-,19+/m0/s1
InChI=1S/C25H42N4O6/c1-13(2)35-23(34)28-19(24(3,4)5)22(33)29-11-16-17(25(16,6)7)18(29)21(32)27-15(12-30)10-14-8-9-26-20(14)31/h13-19,30H,8-12H2,1-7H3,(H,26,31)(H,27,32)(H,28,34)/t14-,15+,16-,17-,18-,19+/m0/s1
SMILES: CC(C)OC(=O)N[C@H](C(=O)N1C[C@H]2[C@@H]([C@H]1C(=O)N[C@@H](C[C@@H]3CCNC3=O)CO)C2(C)C)C(C)(C)C
CC(C)OC(=O)N[C@H](C(=O)N1C[C@H]2[C@@H]([C@H]1C(=O)N[C@@H](C[C@@H]3CCNC3=O)CO)C2(C)C)C(C)(C)C
Biounit #1
homo-dimer
Download coordinates
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Model
Reference
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