2025-05-10_00000117
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ligand
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9BQM
Structure of the SARS-CoV-2 main protease in complex with inhibitor VB-A-26;
X-ray diffraction 2.10Å
Protein #1
306 residues (100% resolved)
Raw Sequence ...
SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ
Canonical Sequence ...
SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ
Non polymer #2
A1ARI
InChI=1S/C28H50N4O7/c1-17(2)38-27(37)32-23(18(3)39-28(4,5)6)26(36)31-22(14-19-10-8-7-9-11-19)25(35)30-21(16-33)15-20-12-13-29-24(20)34/h17-23,33H,7-16H2,1-6H3,(H,29,34)(H,30,35)(H,31,36)(H,32,37)/t18-,20+,21-,22+,23?/m1/s1
InChI=1S/C28H50N4O7/c1-17(2)38-27(37)32-23(18(3)39-28(4,5)6)26(36)31-22(14-19-10-8-7-9-11-19)25(35)30-21(16-33)15-20-12-13-29-24(20)34/h17-23,33H,7-16H2,1-6H3,(H,29,34)(H,30,35)(H,31,36)(H,32,37)/t18-,20+,21-,22+,23?/m1/s1
SMILES: C[C@H]([C@@H](C(=O)N[C@@H](CC1CCCCC1)C(=O)N[C@@H](C[C@@H]2CCNC2=O)CO)NC(=O)OC(C)C)OC(C)(C)C
C[C@H]([C@@H](C(=O)N[C@@H](CC1CCCCC1)C(=O)N[C@@H](C[C@@H]2CCNC2=O)CO)NC(=O)OC(C)C)OC(C)(C)C
Biounit #1
homo-dimer
Download coordinates
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Model
Reference
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