2025-05-03_00000013
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ligand
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8ZCA
Crystal structure of human CD47 ECD bound to Fab of Hu1C8;
X-ray diffraction 2.50Å
Protein #1
218 residues (99% resolved)
Raw Sequence ...
DPMLTQSPSFLSASVGDRVTITCQSSQSVYRNKYLSWYQQKPGKAPKLLIYYASTLASGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCAGDYSDDIENAFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Canonical Sequence ...
DPMLTQSPSFLSASVGDRVTITCQSSQSVYRNKYLSWYQQKPGKAPKLLIYYASTLASGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCAGDYSDDIENAFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
Protein #2
225 residues (95% resolved)
Raw Sequence ...
QSVKESGGGLFQPGGSLRLSCSVSGFSLSSYAISWVRQAPGKGLEYIGYISSIGDPYYADWVKGRFTISRDSSTVYLQMTSLRAEDTAVYFCARSYPGNGDLGRLDIWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
Canonical Sequence ...
QSVKESGGGLFQPGGSLRLSCSVSGFSLSSYAISWVRQAPGKGLEYIGYISSIGDPYYADWVKGRFTISRDSSTVYLQMTSLRAEDTAVYFCARSYPGNGDLGRLDIWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
Protein #3
131 residues (90% resolved)
Raw Sequence ...
(PCA)LLFNKTKSVEFTFGNDTVVIPCFVTNMEAQNTTEVYVKWKFKGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELTREGETIIELKYRVVSWFSPGSHHHHHHHH
Canonical Sequence ...
QLLFNKTKSVEFTFGNDTVVIPCFVTNMEAQNTTEVYVKWKFKGRDIYTFDGALNKSTVPTDFSSAKIEVSQLLKGDASLKMDKSDAVSHTGNYTCEVTELTREGETIIELKYRVVSWFSPGSHHHHHHHH
Non polymer #4
CA
InChI=1S/Ca/q+2
InChI=1S/Ca/q+2
SMILES: [Ca+2]
[Ca+2]
Non polymer #5
NAG
InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6-,7-,8-/m1/s1
InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6-,7-,8-/m1/s1
SMILES: CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O
CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O
Biounit #1
hetero-1-1-1-mer
Download coordinates
Biounit #2
hetero-1-1-1-mer
Download coordinates
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Model
Reference
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