2025-02-15_00000132
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medium
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9DFN
X-ray crystal structure of the second viperin-like enzyme from Trichoderma virens with bound CTP and SAM;
X-ray diffraction 1.50Å
Protein #1
321 residues (88% resolved)
Raw Sequence ...
MHHHHHHSSGVDLGTENLYFQSMGQIPVSVNYFFTRKCNKSCGFCFHTAKTSHMEDISRAKRGLQLLQRAGMKKINFAGGEPFLYPKFLGELVDFCKEDLHLESVSIITNGSLVREEWVRKHAKNIDILACSCDSFDENMNIEIGRGTGNQVEILYRIAKWCRKNEIKFKLNTVVTRLNYEEDMNEHIDTLQPFRWKVFQVLIVEGENDSEKTLRDARRFTISDKQFEVFCSKHRHHKSFVAEPNRLMASSYLLVDEYMRFIDKDGNKLTKSILDVGVEAAMKEIKWDVDAFQERGGVYEWTKENEQVEACSTGMSEKLVW
Canonical Sequence ...
MHHHHHHSSGVDLGTENLYFQSMGQIPVSVNYFFTRKCNKSCGFCFHTAKTSHMEDISRAKRGLQLLQRAGMKKINFAGGEPFLYPKFLGELVDFCKEDLHLESVSIITNGSLVREEWVRKHAKNIDILACSCDSFDENMNIEIGRGTGNQVEILYRIAKWCRKNEIKFKLNTVVTRLNYEEDMNEHIDTLQPFRWKVFQVLIVEGENDSEKTLRDARRFTISDKQFEVFCSKHRHHKSFVAEPNRLMASSYLLVDEYMRFIDKDGNKLTKSILDVGVEAAMKEIKWDVDAFQERGGVYEWTKENEQVEACSTGMSEKLVW
Non polymer #2
CL
InChI=1S/ClH/h1H/p-1
InChI=1S/ClH/h1H/p-1
SMILES: [Cl-]
[Cl-]
Non polymer #3
CTP
InChI=1S/C9H16N3O14P3/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(24-8)3-23-28(19,20)26-29(21,22)25-27(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,21,22)(H2,10,11,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
InChI=1S/C9H16N3O14P3/c10-5-1-2-12(9(15)11-5)8-7(14)6(13)4(24-8)3-23-28(19,20)26-29(21,22)25-27(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,21,22)(H2,10,11,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
SMILES: C1=CN(C(=O)N=C1N)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O
C1=CN(C(=O)N=C1N)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O
Non polymer #4
SAM
InChI=1S/C15H22N6O5S/c1-27(3-2-7(16)15(24)25)4-8-10(22)11(23)14(26-8)21-6-20-9-12(17)18-5-19-13(9)21/h5-8,10-11,14,22-23H,2-4,16H2,1H3,(H2-,17,18,19,24,25)/t7-,8+,10+,11+,14+,27-/m0/s1
InChI=1S/C15H22N6O5S/c1-27(3-2-7(16)15(24)25)4-8-10(22)11(23)14(26-8)21-6-20-9-12(17)18-5-19-13(9)21/h5-8,10-11,14,22-23H,2-4,16H2,1H3,(H2-,17,18,19,24,25)/t7-,8+,10+,11+,14+,27-/m0/s1
SMILES: C[S@@+](CC[C@@H](C(=O)[O-])N)C[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O
C[S@@+](CC[C@@H](C(=O)[O-])N)C[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O
Non polymer #5
SF4
InChI=1S/4Fe.4S
InChI=1S/4Fe.4S
SMILES: [S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
Biounit #1
monomer
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Model
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