2025-02-08_00000281
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ligand
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9GZH
PDGFRA-T674I in complex with covalent ponatinib derivative 19;
X-ray diffraction 2.20Å
Protein #1
355 residues (79% resolved)
Raw Sequence ...
GPGKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIIIEYCFYGDLVNYLHKNRDSFLSHKKKSMLDSEVKNLLSDDNSEGLTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIVENLLPGQYKKSYEKIHLDFLKSD
Canonical Sequence ...
GPGKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIIIEYCFYGDLVNYLHKNRDSFLSHKKKSMLDSEVKNLLSDDNSEGLTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIVENLLPGQYKKSYEKIHLDFLKSD
Non polymer #2
A1IRC
InChI=1S/C26H20F3N5O2/c1-3-24(35)33-22-11-9-19(14-21(22)26(27,28)29)32-25(36)18-7-6-16(2)17(13-18)8-10-20-15-30-23-5-4-12-31-34(20)23/h4-7,9,11-15H,3H2,1-2H3,(H,32,36)(H,33,35)
InChI=1S/C26H20F3N5O2/c1-3-24(35)33-22-11-9-19(14-21(22)26(27,28)29)32-25(36)18-7-6-16(2)17(13-18)8-10-20-15-30-23-5-4-12-31-34(20)23/h4-7,9,11-15H,3H2,1-2H3,(H,32,36)(H,33,35)
SMILES: CCC(=O)Nc1ccc(cc1C(F)(F)F)NC(=O)c2ccc(c(c2)C#Cc3cnc4n3nccc4)C
CCC(=O)Nc1ccc(cc1C(F)(F)F)NC(=O)c2ccc(c(c2)C#Cc3cnc4n3nccc4)C
Biounit #1
monomer
Download coordinates
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Model
Reference
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