2025-01-18_00000226
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ligand
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9EXA
SARS-CoV-2 M protein dimer (short form) in complex with Fab-B and CIM-834;
Electron microscopy 3.20Å
Protein #1
188 residues (100% resolved)
Raw Sequence ...
LEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNY
Canonical Sequence ...
LEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNY
Protein #2
218 residues (100% resolved)
Raw Sequence ...
DIVMTQSPASLAVSLGQRATISCKASQSIDYDGDNYMNWYQQKPGQPPKLLIYTTSNLESGIPARFSGSGSGTDFTLNIHPVEEGDAATYYCQQNNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Canonical Sequence ...
DIVMTQSPASLAVSLGQRATISCKASQSIDYDGDNYMNWYQQKPGQPPKLLIYTTSNLESGIPARFSGSGSGTDFTLNIHPVEEGDAATYYCQQNNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
Protein #3
213 residues (100% resolved)
Raw Sequence ...
EVQLQQSGPELVKPGASMKISCKTSGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGDTSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCEVINTYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
Canonical Sequence ...
EVQLQQSGPELVKPGASMKISCKTSGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGDTSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCEVINTYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
Non polymer #4
A1H7W
InChI=1S/C27H42N8O/c1-19(2)16-24-20(3)30-27(31-21(24)4)35-13-8-23(9-14-35)33(5)25-17-22(18-29-32-25)26(36)28-10-15-34-11-6-7-12-34/h17-19,23H,6-16H2,1-5H3,(H,28,36)
InChI=1S/C27H42N8O/c1-19(2)16-24-20(3)30-27(31-21(24)4)35-13-8-23(9-14-35)33(5)25-17-22(18-29-32-25)26(36)28-10-15-34-11-6-7-12-34/h17-19,23H,6-16H2,1-5H3,(H,28,36)
SMILES: Cc1c(c(nc(n1)N2CCC(CC2)N(C)c3cc(cnn3)C(=O)NCCN4CCCC4)C)CC(C)C
Cc1c(c(nc(n1)N2CCC(CC2)N(C)c3cc(cnn3)C(=O)NCCN4CCCC4)C)CC(C)C
Biounit #1
hetero-2-2-2-mer
Download coordinates
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Model
Reference
100%