2025-01-18_00000117|hard|8ZK2

Cryo-EM structure of photosynthetic LH1-RC core complex of Roseospirillum parvum; Electron microscopy 2.65Å
Protein #1 362 residues (94% resolved)

MSNDFNSRFVSLMARKGRTSPRAPVWVGGWFVVGLITIGLLTVMMGPAGTYTQSGYRGLMMGEVDMADELADDMAAPKNQVPAASERFPDEGPLAGEVYVNVPVLAHLSADNFNRLMVAITEWVSPEEGCNYCHDPDDLTAERPYTKIVSRRMLEMVMYLNSQWGDHVAPSGVTCWTCHRGNPVPENIWFKNDDADGGSGALGNTFGQNAASWDAGLSALPNDVMEAYLLDDQNLRITPTNDLPMNGVTQIGTKQAEWTYGMMFHISKGLGVNCTYCHNSQSFRVWEMSPPARVTAWHGIQMTRAINVDFLDPLQPEYPANRLGPEGDAPKANCATCHQGAFKPMYGENVIDDYPSLAAPGE

MSNDFNSRFVSLMARKGRTSPRAPVWVGGWFVVGLITIGLLTVMMGPAGTYTQSGYRGLMMGEVDMADELADDMAAPKNQVPAASERFPDEGPLAGEVYVNVPVLAHLSADNFNRLMVAITEWVSPEEGCNYCHDPDDLTAERPYTKIVSRRMLEMVMYLNSQWGDHVAPSGVTCWTCHRGNPVPENIWFKNDDADGGSGALGNTFGQNAASWDAGLSALPNDVMEAYLLDDQNLRITPTNDLPMNGVTQIGTKQAEWTYGMMFHISKGLGVNCTYCHNSQSFRVWEMSPPARVTAWHGIQMTRAINVDFLDPLQPEYPANRLGPEGDAPKANCATCHQGAFKPMYGENVIDDYPSLAAPGE
Protein #2 275 residues (99% resolved)

MAMLSFERKYRVRGGSLIGGDLFDFWVGPFYVGFFGVTTLFFTFVGVALIAYGWVMDPSDPTVWQLSIAPPDLSYGLGFAPLMEGGLWQIITICAVGAFVSWALREVEICRKLGIGFHVPFAFSFAIAAYVALTVVRPMLLGAWGHGFPYGIMSHLDWVSNVGYQFLHFHYNPGHMLGITFFFTTALALAMHGGLILSAANPGKGEKVKGPEHENTFFRDTVGYSIGTLGIHRLGLILALSAVFWSIVCMLISGPVWTKGWPEWWNWWYELPIWA

MAMLSFERKYRVRGGSLIGGDLFDFWVGPFYVGFFGVTTLFFTFVGVALIAYGWVMDPSDPTVWQLSIAPPDLSYGLGFAPLMEGGLWQIITICAVGAFVSWALREVEICRKLGIGFHVPFAFSFAIAAYVALTVVRPMLLGAWGHGFPYGIMSHLDWVSNVGYQFLHFHYNPGHMLGITFFFTTALALAMHGGLILSAANPGKGEKVKGPEHENTFFRDTVGYSIGTLGIHRLGLILALSAVFWSIVCMLISGPVWTKGWPEWWNWWYELPIWA
Protein #3 323 residues (89% resolved)

MSEYQNIFTSVQVRSAPHESVALPRGAWPRSKASTLSYWLGKIGDAQIGPIYLGATGIASLIFGFVAIEIIGLNMLASVDWNPVEFLRQFPWLALEPPGPEHGLRAMPPLNEGGWWVMAGFFLTASILLWWVRTWQRAKDLGMGTHIAWAFASAIFFYLVLGFIRPVMLGSWSEAPPFGIFPHLDWTAAFSIRYGNLYYNPFHMLSIAFLYGSALIFAMHGATILSVSRLGGDREVEQITDRGTAAERAALFWRWTMGFNATMESIHRWGWWCAVFVTLTAGLGILLSGTVVDNWYLWAVKHGVAPTYPDVFPGVTDPAAIGG

MSEYQNIFTSVQVRSAPHESVALPRGAWPRSKASTLSYWLGKIGDAQIGPIYLGATGIASLIFGFVAIEIIGLNMLASVDWNPVEFLRQFPWLALEPPGPEHGLRAMPPLNEGGWWVMAGFFLTASILLWWVRTWQRAKDLGMGTHIAWAFASAIFFYLVLGFIRPVMLGSWSEAPPFGIFPHLDWTAAFSIRYGNLYYNPFHMLSIAFLYGSALIFAMHGATILSVSRLGGDREVEQITDRGTAAERAALFWRWTMGFNATMESIHRWGWWCAVFVTLTAGLGILLSGTVVDNWYLWAVKHGVAPTYPDVFPGVTDPAAIGG
Protein #4 254 residues (96% resolved)

MIGDFSSYMDVAQIVLYAFWIFLFGVIFYLRREDRREGYPLERDTDGKIMSIGPWNLPAPKIFYKPQGGTYSAPNAARDTRAIKATRVGNFPGAPLDPTGDPLVDGVGPAAYAERADTPDKTLEGRTRIVPLRTDADLWLAPEDPDPRGMAVVAGCRTTVGAVSDVWVDRAENIIRYLEVSLGGAEGGAKAGKTVLVPMPMAVFNDLTRTVTVKSMDAKSFANVPTPKSAEQITLREEDRIQAYYAGGTLYANK

MIGDFSSYMDVAQIVLYAFWIFLFGVIFYLRREDRREGYPLERDTDGKIMSIGPWNLPAPKIFYKPQGGTYSAPNAARDTRAIKATRVGNFPGAPLDPTGDPLVDGVGPAAYAERADTPDKTLEGRTRIVPLRTDADLWLAPEDPDPRGMAVVAGCRTTVGAVSDVWVDRAENIIRYLEVSLGGAEGGAKAGKTVLVPMPMAVFNDLTRTVTVKSMDAKSFANVPTPKSAEQITLREEDRIQAYYAGGTLYANK
Protein #5 68 residues (72% resolved)

MATTENVTSSTGLTEAEAKEFHAVYSQSAAGFLAVCAVAHVLAWMWRPFWPGAEGWVMDTAQNLTFLA

MATTENVTSSTGLTEAEAKEFHAVYSQSAAGFLAVCAVAHVLAWMWRPFWPGAEGWVMDTAQNLTFLA
Protein #6 67 residues (79% resolved)

MTFSTHKVWLMFDPRSTLVALAAFLVVLALLIHFLCLGHDRFNWLEGNPAATKAAAAAVTMPVNPVA

MTFSTHKVWLMFDPRSTLVALAAFLVVLALLIHFLCLGHDRFNWLEGNPAATKAAAAAVTMPVNPVA
Non polymer #7 8K6

InChI=1S/C18H38/c1-3-5-7-9-11-13-15-17-18-16-14-12-10-8-6-4-2/h3-18H2,1-2H3

CCCCCCCCCCCCCCCCCC
Non polymer #8 BCL

InChI=1S/C55H75N4O6.Mg/c1-13-39-34(7)41-29-46-48(38(11)60)36(9)43(57-46)27-42-35(8)40(52(58-42)50-51(55(63)64-12)54(62)49-37(10)44(59-53(49)50)28-45(39)56-41)23-24-47(61)65-26-25-33(6)22-16-21-32(5)20-15-19-31(4)18-14-17-30(2)3;/h25,27-32,34-35,39-40,51H,13-24,26H2,1-12H3,(H-,56,57,58,59,60,62);/q-1;+2/p-1/b33-25+;/t31-,32-,34-,35+,39-,40+,51-;/m1./s1

CC[C@@H]1[C@H](C2=CC3=C(C(=C4[N-]3[Mg+2]56[N]2=C1C=C7[N-]5C8=C([C@H](C(=O)C8=C7C)C(=O)OC)C9=[N]6C(=C4)[C@H]([C@@H]9CCC(=O)OC/C=C(C)/CCC[C@H](C)CCC[C@H](C)CCCC(C)C)C)C)C(=O)C)C
Non polymer #9 BPH

InChI=1S/C55H76N4O6/c1-13-39-34(7)41-29-46-48(38(11)60)36(9)43(57-46)27-42-35(8)40(52(58-42)50-51(55(63)64-12)54(62)49-37(10)44(59-53(49)50)28-45(39)56-41)23-24-47(61)65-26-25-33(6)22-16-21-32(5)20-15-19-31(4)18-14-17-30(2)3/h25,27-32,34-35,39-40,51,57,59H,13-24,26H2,1-12H3/b33-25+,41-29-,42-27-,43-27-,44-28-,45-28-,46-29-,52-50-/t31-,32-,34-,35+,39-,40+,51-/m1/s1

CCC1c2/cc3/c(c4c([nH]3)c(c5n/c(cc6c(c(c([nH]6)/cc(
Non polymer #10 CRT

InChI=1S/C42H60O2/c1-35(23-15-25-37(3)27-17-29-39(5)31-19-33-41(7,8)43-11)21-13-14-22-36(2)24-16-26-38(4)28-18-30-40(6)32-20-34-42(9,10)44-12/h13-32H,33-34H2,1-12H3/b14-13-,23-15+,24-16+,27-17+,28-18+,31-19+,32-20+,35-21+,36-22+,37-25+,38-26+,39-29+,40-30+

C/C(=CC=CC(=CC=CC(=CC=C/C=C(C)/C=C/C=C(C)/C=C/C=C(C)/C=C/CC(C)(C)OC)C)C)/C=CCC(C)(C)OC
Non polymer #11 FE

InChI=1S/Fe/q+3

[Fe+3]
Non polymer #12 HEC

InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,9-12H2,1-6H3,(H,39,40)(H,41,42);/q-4;+4/b21-7?,22-8?,26-13-,29-14-,30-15-,31-16-;

CC=C1C(=C2C=C3C(=CC)C(=C4N3[Fe]56N2C1=Cc7n5c(c(c7C)CCC(=O)O)C=C8N6C(=C4)C(=C8CCC(=O)O)C)C)C
Non polymer #13 LMT

InChI=1S/C24H46O11/c1-2-3-4-5-6-7-8-9-10-11-12-32-23-21(31)19(29)22(16(14-26)34-23)35-24-20(30)18(28)17(27)15(13-25)33-24/h15-31H,2-14H2,1H3/t15-,16-,17-,18+,19-,20-,21-,22-,23-,24-/m1/s1

CCCCCCCCCCCCO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O[C@@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O)O)O
Non polymer #14 MG

InChI=1S/Mg/q+2

[Mg+2]
Non polymer #15 MQ8

InChI=1S/C51H72O2/c1-38(2)20-13-21-39(3)22-14-23-40(4)24-15-25-41(5)26-16-27-42(6)28-17-29-43(7)30-18-31-44(8)32-19-33-45(9)36-37-47-46(10)50(52)48-34-11-12-35-49(48)51(47)53/h11-12,20,22,24,26,28,30,32,34-36H,13-19,21,23,25,27,29,31,33,37H2,1-10H3/b39-22+,40-24+,41-26-,42-28+,43-30+,44-32+,45-36+

CC1=C(C(=O)c2ccccc2C1=O)CC=C(/C)CCC=C(/C)CCC=C(/C)CCC=C(/C)CCC=C(C)/CCC=C(C)CCC=C(/C)CCC=C(C)C
Non polymer #16 PGV

InChI=1S/C40H77O10P/c1-3-5-7-9-11-13-15-17-18-20-22-24-26-28-30-32-40(44)50-38(36-49-51(45,46)48-34-37(42)33-41)35-47-39(43)31-29-27-25-23-21-19-16-14-12-10-8-6-4-2/h13,15,37-38,41-42H,3-12,14,16-36H2,1-2H3,(H,45,46)/b15-13-/t37-,38+/m0/s1

CCCCCCCCCCCCCCCC(=O)OC[C@H](CO[P@](=O)(O)OC[C@H](CO)O)OC(=O)CCCCCCCCCC=C/CCCCCC
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Reference