2024-12-28_00000164|hard|9IW3

Cryo-EM structure of Lactobacillus casei DdmE bound with guide and target; Electron microscopy 3.58Å
DNA #1 25 bases

(DA)(DG)(DA)(DT)(DT)(DA)(DG)(DA)(DG)(DC)(DC)(DG)(DT)(DC)(DA)(DC)(DG)(DT)(DA)(DT)(DC)(DA)(DA)(DG)(DT)

AGATTAGAGCCGTCACGTATCAAGT
DNA #2 15 bases

(DT)(DG)(DA)(DC)(DG)(DG)(DC)(DT)(DC)(DT)(DA)(DA)(DT)(DC)(DT)

TGACGGCTCTAATCT
DNA #3 11 bases

(DC)(DT)(DT)(DG)(DA)(DT)(DA)(DC)(DG)(DA)(DC)

CTTGATACGAC
Protein #4 715 residues (100% resolved)

MEQQSMIRTTRLDYKINMMQLQADFKFLVVKIIDRSAFKDYNKLLASWSPEAVTSIRGRYKKGDYLMMFRQLPAIPTIAGLELHEILLEDMGEFKIYPNHLLQLLLNQQSANEKSLLEPCKTPELLISGEEWYREFRDMRQQYYALKLKVNWQQDLEMSVQTFTQVTEFQWDKQIYQFDEKRGRFQLCYQPSPGIYFVQGNHSANRNYIDFLSLQNKSSFYKSKVGVVQLVLDNLNLNAEKYLLRPVTFHKSLVEHSSRLKLSKRETIWQQLAGSSLNIYAQVNDRLSQELADQLADHLIRSQLVRKNSVHVVRSQKIQSGFNIQVIRDVRGRAAEDGYEVAKNDQIVQHLTVENFGHYQEGDKEITWKPKVSGKHHDPARDVAIVKLIQELCIKRDLANGKLKTVEPKLASLTQPLEFYYFAFLKKSFDPEVMVIKLAFTPEMELRFSKKKVRLNALTSDDEYTQVCKRVFDSLAAPKFYSAWDSVDCVVRSGNKQLLIQRLNRTIMPDGKQIRKQLELNRPDKTLWRDKVVEELGELRPMVSGDSDYVAAYEQLQALVTGMRPSFPLKDLDEAARKAGLNPKRRDMRQVNQFLTENATFTLKTTLQRELPDSPLAGMKWIGLTRIEEGEGHFNTFYFVGSDKSLKPVVNRAVTLRRLLPLAGDAGIIDELFPKLAAMMSVEFVRSGQYTVVPYPVKYLREYWYSILRQHPEYR

MEQQSMIRTTRLDYKINMMQLQADFKFLVVKIIDRSAFKDYNKLLASWSPEAVTSIRGRYKKGDYLMMFRQLPAIPTIAGLELHEILLEDMGEFKIYPNHLLQLLLNQQSANEKSLLEPCKTPELLISGEEWYREFRDMRQQYYALKLKVNWQQDLEMSVQTFTQVTEFQWDKQIYQFDEKRGRFQLCYQPSPGIYFVQGNHSANRNYIDFLSLQNKSSFYKSKVGVVQLVLDNLNLNAEKYLLRPVTFHKSLVEHSSRLKLSKRETIWQQLAGSSLNIYAQVNDRLSQELADQLADHLIRSQLVRKNSVHVVRSQKIQSGFNIQVIRDVRGRAAEDGYEVAKNDQIVQHLTVENFGHYQEGDKEITWKPKVSGKHHDPARDVAIVKLIQELCIKRDLANGKLKTVEPKLASLTQPLEFYYFAFLKKSFDPEVMVIKLAFTPEMELRFSKKKVRLNALTSDDEYTQVCKRVFDSLAAPKFYSAWDSVDCVVRSGNKQLLIQRLNRTIMPDGKQIRKQLELNRPDKTLWRDKVVEELGELRPMVSGDSDYVAAYEQLQALVTGMRPSFPLKDLDEAARKAGLNPKRRDMRQVNQFLTENATFTLKTTLQRELPDSPLAGMKWIGLTRIEEGEGHFNTFYFVGSDKSLKPVVNRAVTLRRLLPLAGDAGIIDELFPKLAAMMSVEFVRSGQYTVVPYPVKYLREYWYSILRQHPEYR
Non polymer #5 MG

InChI=1S/Mg/q+2

[Mg+2]
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Reference