2024-12-28_00000061|hard|8XK3

Structure of the Argonaute protein from Kurthia massiliensis in complex with guide DNA and 19-mer target DNA in target-cleaved state; Electron microscopy 2.76Å
Protein #1 737 residues (94% resolved)

MEAYITEMVSRERANELEVYVYVFPRKQSDNNYEGVYHIMRAWQRANDLPLAYNQHTIMAFSPVRHMCGYTPMETQKRHINIDSPFERALLERLIKNSLIFTAERHLHAKRVGHALRLNQVQQIRQVIIYEAIELYVNIIENRISIGFHLTHQFEYVYTLQSMIEQGKTIRPGMRVVHSNGRQHYTYTVENVATYGVTDRCPLLQTSIYQYYVEKGAQHILRTFTRSTRVIHVRTKEQRLSYAATLLKPLCTFETMQPQDVLNVSKCIKLSASKRMKCTYRWIQQLRAQYRHLTFAPNPFTIAQNGYKLDQLSTPKVHFHRDYATVVSGMKTGKLYKGGNIKISVLFDEDFYLKHHITKKDIYQFIAVLQKIAIAQGVNMTISTSTKSITGKFTDDFFHHFTEEVEALQPIFAQTTVLAFITSTHLSNKKTRSYQLLKQYFGGKWDIASQVITEKTIEAFQKILHKHGLKNFYPNDEQHCLRVIDVLKNESFYYTVMNILLGVYVKSGIQPWILANTTHSDCFIGIDVSHENGNSAAGMMNVIGSQGHLIQQAPLNGILAGEKIDDTLLANLLKQMIKAYHTQFQRFPKHITIHRDGFWREHTALVEKIMSHYEITYDIVEIIKKPNRRMAFFNSVDNTFSTRQGTVYQRGNEAFLCATNPQQKVGMAQPIKIHQVTKTLPFSHIIEDVYNLSFLHIHAMNKMRLPATIHYADLSATAYQRGQVMPRSGNQTNLPFV

MEAYITEMVSRERANELEVYVYVFPRKQSDNNYEGVYHIMRAWQRANDLPLAYNQHTIMAFSPVRHMCGYTPMETQKRHINIDSPFERALLERLIKNSLIFTAERHLHAKRVGHALRLNQVQQIRQVIIYEAIELYVNIIENRISIGFHLTHQFEYVYTLQSMIEQGKTIRPGMRVVHSNGRQHYTYTVENVATYGVTDRCPLLQTSIYQYYVEKGAQHILRTFTRSTRVIHVRTKEQRLSYAATLLKPLCTFETMQPQDVLNVSKCIKLSASKRMKCTYRWIQQLRAQYRHLTFAPNPFTIAQNGYKLDQLSTPKVHFHRDYATVVSGMKTGKLYKGGNIKISVLFDEDFYLKHHITKKDIYQFIAVLQKIAIAQGVNMTISTSTKSITGKFTDDFFHHFTEEVEALQPIFAQTTVLAFITSTHLSNKKTRSYQLLKQYFGGKWDIASQVITEKTIEAFQKILHKHGLKNFYPNDEQHCLRVIDVLKNESFYYTVMNILLGVYVKSGIQPWILANTTHSDCFIGIDVSHENGNSAAGMMNVIGSQGHLIQQAPLNGILAGEKIDDTLLANLLKQMIKAYHTQFQRFPKHITIHRDGFWREHTALVEKIMSHYEITYDIVEIIKKPNRRMAFFNSVDNTFSTRQGTVYQRGNEAFLCATNPQQKVGMAQPIKIHQVTKTLPFSHIIEDVYNLSFLHIHAMNKMRLPATIHYADLSATAYQRGQVMPRSGNQTNLPFV
DNA #2 18 bases

(DT)(DG)(DA)(DG)(DG)(DT)(DA)(DG)(DT)(DA)(DG)(DG)(DT)(DT)(DG)(DT)(DA)(DT)

TGAGGTAGTAGGTTGTAT
DNA #3 10 bases

(DT)(DA)(DC)(DT)(DA)(DC)(DC)(DT)(DC)(DA)

TACTACCTCA
DNA #4 9 bases

(DT)(DA)(DT)(DA)(DC)(DA)(DA)(DC)(DC)

TATACAACC
Non polymer #5 MN

InChI=1S/Mn/q+2

[Mn+2]
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Reference