2024-12-14_00000211|hard|8JAP

Cryo-EM structure of SARS-CoV-2 WT RBD in complex with W328-6H2 (local refinement); Electron microscopy 3.81Å
Protein #1 540 residues (41% resolved)

MFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVN

MFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLGVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLVRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVN
Protein #2 107 residues (98% resolved)

QVQLVQSGSELKKPGASVTVSCKASGYSFPTHAMNWVRQAPGQGLEWMGWIPTYAGFTGRFVFSLDTSVSTAYLQISSLKADDTAVYYCARGHVLEWFQGTLVTVSS

QVQLVQSGSELKKPGASVTVSCKASGYSFPTHAMNWVRQAPGQGLEWMGWIPTYAGFTGRFVFSLDTSVSTAYLQISSLKADDTAVYYCARGHVLEWFQGTLVTVSS
Protein #3 112 residues (97% resolved)

DVVMTQSPLSLSVTPGQPASISCKSSQTLLHSDGQTSFYWYLQKPGQSPQLLIYDISSRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTQFPWTFGQGTKVEIK

DVVMTQSPLSLSVTPGQPASISCKSSQTLLHSDGQTSFYWYLQKPGQSPQLLIYDISSRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTQFPWTFGQGTKVEIK
Non polymer #4 NAG

InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5-,6-,7-,8-/m1/s1

CC(=O)N[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O)CO)O)O
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